Difference between revisions of "RXN0-6725"

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(Created page with "Category:reaction == Reaction GLUTAMATESYN-RXN == * direction: ** left-to-right * common-name: ** l-glutamate:nadp+ oxidoreductase (transaminating) * ec-number: ** [http:/...")
(Created page with "Category:reaction == Reaction FATTY-ACID-PEROXIDASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.11.1.3 ec-1.11.1.3] == Reaction for...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTAMATESYN-RXN ==
+
== Reaction FATTY-ACID-PEROXIDASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** l-glutamate:nadp+ oxidoreductase (transaminating)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.1.13 ec-1.4.1.13]
+
** [http://enzyme.expasy.org/EC/1.11.1.3 ec-1.11.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[GLT]][c] '''+''' 1 [[NADP]][c]
+
* 2 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-388]][c] '''+''' 3 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20190]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ10812]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10813]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ04922]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUTSYN-PWY]], L-glutamate biosynthesis I:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[GLUTAMINEFUM-PWY]], L-glutamine degradation II:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15503 15503]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23960 23960]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00114 R00114]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01703 R01703]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q05756 Q05756]
 
−
** [http://www.uniprot.org/uniprot/Q05755 Q05755]
 
−
** [http://www.uniprot.org/uniprot/Q9PJA4 Q9PJA4]
 
−
** [http://www.uniprot.org/uniprot/Q9PJA2 Q9PJA2]
 
−
** [http://www.uniprot.org/uniprot/Q9CG25 Q9CG25]
 
−
** [http://www.uniprot.org/uniprot/Q58746 Q58746]
 
−
** [http://www.uniprot.org/uniprot/P09831 P09831]
 
−
** [http://www.uniprot.org/uniprot/Q9CG24 Q9CG24]
 
−
** [http://www.uniprot.org/uniprot/P09832 P09832]
 
−
** [http://www.uniprot.org/uniprot/P39812 P39812]
 
−
** [http://www.uniprot.org/uniprot/Q9S2Y9 Q9S2Y9]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=l-glutamate:nadp+ oxidoreductase (transaminating)}}
+
{{#set: ec-number=ec-1.11.1.3}}
−
{{#set: ec-number=ec-1.4.1.13}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 15:37, 5 January 2021

Reaction FATTY-ACID-PEROXIDASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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