Difference between revisions of "RXN0-6731"

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(Created page with "Category:reaction == Reaction ACONITATEHYDR-RXN == * direction: ** reversible * common-name: ** cis-aconitate hydratase ** d-threo-isocitrate hydro-lyase (cis-aconitate-fo...")
(Created page with "Category:reaction == Reaction RXN0-6731 == * direction: ** left-to-right * common-name: ** 16s rrna m2g1516 methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ACONITATEHYDR-RXN ==
+
== Reaction RXN0-6731 ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** cis-aconitate hydratase
+
** 16s rrna m2g1516 methyltransferase
** d-threo-isocitrate hydro-lyase (cis-aconitate-forming)
+
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.1.1.242 ec-2.1.1.242]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c]
+
* 1 [[16S-rRNA-guanine1516]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[16S-rRNA-N2methylguanine1516]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ18471]]
+
* Gene: [[SJ19298]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ22396]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* [[PWY-6549]], L-glutamine biosynthesis III:
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5392]], reductive TCA cycle II:
 
** '''6''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-5690]], TCA cycle II (plants and fungi):
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase):
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[TCA]], TCA cycle I (prokaryotic):
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
* [[REDCITCYC]], TCA cycle VI (Helicobacter):
 
** '''5''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY66-398]], TCA cycle III (animals):
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-7254]], TCA cycle VII (acetate-producers):
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase):
 
** '''10''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-5913]], partial TCA cycle (obligate autotrophs):
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[FERMENTATION-PWY]], mixed acid fermentation:
 
** '''11''' reactions found over '''16''' reactions in the full pathway
 
* [[P23-PWY]], reductive TCA cycle I:
 
** '''9''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-7124]], ethylene biosynthesis V (engineered):
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-6728]], methylaspartate cycle:
 
** '''11''' reactions found over '''19''' reactions in the full pathway
 
* [[GLYOXYLATE-BYPASS]], glyoxylate cycle:
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR123334
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22147 22147]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43221 43221]
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
** [http://www.genome.jp/dbget-bin/www_bget?R01900 R01900]
+
{{#set: common-name=16s rrna m2g1516 methyltransferase}}
{{#set: direction=reversible}}
+
{{#set: ec-number=ec-2.1.1.242}}
{{#set: common-name=cis-aconitate hydratase|d-threo-isocitrate hydro-lyase (cis-aconitate-forming)}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=15}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN0-6731

  • direction:
    • left-to-right
  • common-name:
    • 16s rrna m2g1516 methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR123334
  • RHEA: