Difference between revisions of "RXN0-6731"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2002 PWY-2002] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3803 tax-38...")
(Created page with "Category:reaction == Reaction ACONITATEHYDR-RXN == * direction: ** reversible * common-name: ** cis-aconitate hydratase ** d-threo-isocitrate hydro-lyase (cis-aconitate-fo...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2002 PWY-2002] ==
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== Reaction ACONITATEHYDR-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3803 tax-3803]
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** reversible
 
* common-name:
 
* common-name:
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** isoflavonoid biosynthesis i
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** cis-aconitate hydratase
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== Reaction(s) found ==
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** d-threo-isocitrate hydro-lyase (cis-aconitate-forming)
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* [[RXN-3221]]
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== Reaction formula ==
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== Reaction(s) not found ==
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* 1 [[CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-3501 RXN-3501]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-3481 RXN-3481]
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* Gene: [[SJ18471]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-3283 RXN-3283]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-3284 RXN-3284]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: taxonomic-range=tax-3803}}
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** Category: [[orthology]]
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{{#set: common-name=isoflavonoid biosynthesis i}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb reaction found=1}}
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* Gene: [[SJ22396]]
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{{#set: completion rate=0.2}}
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** Category: [[orthology]]
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{{#set: nb total reaction=5}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-6549]], L-glutamine biosynthesis III:
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5392]], reductive TCA cycle II:
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** '''6''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-5690]], TCA cycle II (plants and fungi):
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase):
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[TCA]], TCA cycle I (prokaryotic):
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[REDCITCYC]], TCA cycle VI (Helicobacter):
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY66-398]], TCA cycle III (animals):
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7254]], TCA cycle VII (acetate-producers):
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase):
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** '''10''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-5913]], partial TCA cycle (obligate autotrophs):
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[FERMENTATION-PWY]], mixed acid fermentation:
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** '''11''' reactions found over '''16''' reactions in the full pathway
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* [[P23-PWY]], reductive TCA cycle I:
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** '''9''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-7124]], ethylene biosynthesis V (engineered):
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6728]], methylaspartate cycle:
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** '''11''' reactions found over '''19''' reactions in the full pathway
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* [[GLYOXYLATE-BYPASS]], glyoxylate cycle:
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** '''6''' reactions found over '''6''' reactions in the full pathway
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</div>
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22147 22147]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01900 R01900]
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{{#set: direction=reversible}}
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{{#set: common-name=cis-aconitate hydratase|d-threo-isocitrate hydro-lyase (cis-aconitate-forming)}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=15}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:47, 18 December 2020

Reaction ACONITATEHYDR-RXN

  • direction:
    • reversible
  • common-name:
    • cis-aconitate hydratase
    • d-threo-isocitrate hydro-lyase (cis-aconitate-forming)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6549, L-glutamine biosynthesis III:
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5392, reductive TCA cycle II:
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-5690, TCA cycle II (plants and fungi):
    • 8 reactions found over 9 reactions in the full pathway
  • P105-PWY, TCA cycle IV (2-oxoglutarate decarboxylase):
    • 10 reactions found over 11 reactions in the full pathway
  • TCA, TCA cycle I (prokaryotic):
    • 9 reactions found over 10 reactions in the full pathway
  • REDCITCYC, TCA cycle VI (Helicobacter):
    • 5 reactions found over 9 reactions in the full pathway
  • PWY66-398, TCA cycle III (animals):
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-7254, TCA cycle VII (acetate-producers):
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-6969, TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase):
    • 10 reactions found over 12 reactions in the full pathway
  • PWY-5913, partial TCA cycle (obligate autotrophs):
    • 10 reactions found over 11 reactions in the full pathway
  • FERMENTATION-PWY, mixed acid fermentation:
    • 11 reactions found over 16 reactions in the full pathway
  • P23-PWY, reductive TCA cycle I:
    • 9 reactions found over 12 reactions in the full pathway
  • PWY-7124, ethylene biosynthesis V (engineered):
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-6728, methylaspartate cycle:
    • 11 reactions found over 19 reactions in the full pathway
  • GLYOXYLATE-BYPASS, glyoxylate cycle:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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