Difference between revisions of "RXN0-6731"

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(Created page with "Category:reaction == Reaction APIGNAR-RXN == * direction: ** left-to-right * common-name: ** naringenin chalcone isomerase ** chalcone isomerase * ec-number: ** [http://en...")
(Created page with "Category:reaction == Reaction BTUR2-RXN == * direction: ** left-to-right * common-name: ** cobinamide adenosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.5....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction APIGNAR-RXN ==
+
== Reaction BTUR2-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** naringenin chalcone isomerase
+
** cobinamide adenosyltransferase
** chalcone isomerase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/5.5.1.6 ec-5.5.1.6]
+
** [http://enzyme.expasy.org/EC/2.5.1.17 ec-2.5.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-20012]][c] '''=>''' 1 [[NARINGENIN-CMPD]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[COBINAMIDE]][c] '''=>''' 1 [[ADENOSYLCOBINAMIDE]][c] '''+''' 1 [[P3I]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ09285]]
+
* Gene: [[SJ11469]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ20427]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis:
+
* [[COBALSYN-PWY]], superpathway of adenosylcobalamin salvage from cobinamide I:
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
* [[PWY-6787]], flavonoid biosynthesis (in equisetum):
+
* [[PWY-6269]], superpathway of adenosylcobalamin salvage from cobinamide II:
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
* [[PWY-7397]], naringenin biosynthesis (engineered):
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7897]], flavonoid di-C-glucosylation:
 
** '''3''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14726 14726]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R02446 R02446]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07268 R07268]
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P11650 P11650]
 
** [http://www.uniprot.org/uniprot/P11651 P11651]
 
** [http://www.uniprot.org/uniprot/P41088 P41088]
 
** [http://www.uniprot.org/uniprot/P14298 P14298]
 
** [http://www.uniprot.org/uniprot/Q42925 Q42925]
 
** [http://www.uniprot.org/uniprot/Q42926 Q42926]
 
** [http://www.uniprot.org/uniprot/Q08704 Q08704]
 
** [http://www.uniprot.org/uniprot/P28012 P28012]
 
** [http://www.uniprot.org/uniprot/P41089 P41089]
 
** [http://www.uniprot.org/uniprot/O81980 O81980]
 
** [http://www.uniprot.org/uniprot/O22604 O22604]
 
** [http://www.uniprot.org/uniprot/O22651 O22651]
 
** [http://www.uniprot.org/uniprot/Q43754 Q43754]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=naringenin chalcone isomerase|chalcone isomerase}}
+
{{#set: common-name=cobinamide adenosyltransferase}}
{{#set: ec-number=ec-5.5.1.6}}
+
{{#set: ec-number=ec-2.5.1.17}}
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:20, 14 January 2021

Reaction BTUR2-RXN

  • direction:
    • left-to-right
  • common-name:
    • cobinamide adenosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • COBALSYN-PWY, superpathway of adenosylcobalamin salvage from cobinamide I:
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6269, superpathway of adenosylcobalamin salvage from cobinamide II:
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links