Difference between revisions of "RXN0-7230"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6201 RXN-6201] == * direction: ** left-to-right * common-name: ** 5-hydroxy-2-oxo-4-ureido-2,5-...")
(Created page with "Category:reaction == Reaction RXN0-7230 == * direction: ** left-to-right * common-name: ** choline dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.99.1 ec-1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6201 RXN-6201] ==
+
== Reaction RXN0-7230 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1h imidazole-5-carboxylate decarboxylase
+
** choline dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.97 ec-4.1.1.97]
+
** [http://enzyme.expasy.org/EC/1.1.99.1 ec-1.1.99.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-5821]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[S-ALLANTOIN]][c]
+
* 1 [[CHOLINE]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[BETAINE_ALDEHYDE]][c] '''+''' 1 [[ETR-Quinols]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15812]]
+
* Gene: [[SJ07158]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06047]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12409]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ22552]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09287]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7394]], urate conversion to allantoin II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7394 PWY-7394]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5691]], urate conversion to allantoin I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5691 PWY-5691]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7849]], urate conversion to allantoin III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7849 PWY-7849]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR123404
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26302 26302]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R06604 R06604]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1h imidazole-5-carboxylate decarboxylase}}
+
{{#set: common-name=choline dehydrogenase}}
−
{{#set: ec-number=ec-4.1.1.97}}
+
{{#set: ec-number=ec-1.1.99.1}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN0-7230

  • direction:
    • left-to-right
  • common-name:
    • choline dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR123404





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