Difference between revisions of "RXN1G-499"

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(Created page with "Category:reaction == Reaction 2.7.8.23-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.7.8.23 ec-2.7.8.23] == Reaction formula == * 1 1-...")
(Created page with "Category:reaction == Reaction DIPHTINE--AMMONIA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** diphthine—ammonia ligase * ec-number: ** [http://enzyme...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 2.7.8.23-RXN ==
+
== Reaction DIPHTINE--AMMONIA-LIGASE-RXN ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 +
* common-name:
 +
** diphthine—ammonia ligase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.7.8.23 ec-2.7.8.23]
+
** [http://enzyme.expasy.org/EC/6.3.1.14 ec-6.3.1.14]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[1-CARBOXYVINYL-CARBOXYPHOSPHONATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[3-HYDROHYDROXYPHOSPHORYLPYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[DIPHTINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DIPHTHAMIDE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ05283]]
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* Gene: [[SJ03200]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ05932]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ05933]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ02830]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6482]], diphthamide biosynthesis I (archaea):
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7546]], diphthamide biosynthesis II (eukaryotes):
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14045 14045]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19754 19754]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R05165 R05165]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03613 R03613]
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-2.7.8.23}}
+
{{#set: common-name=diphthine&mdash;ammonia ligase}}
{{#set: nb gene associated=4}}
+
{{#set: ec-number=ec-6.3.1.14}}
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=1}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: nb pathway associated=2}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:03, 5 January 2021

Reaction DIPHTINE--AMMONIA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • diphthine—ammonia ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6482, diphthamide biosynthesis I (archaea):
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7546, diphthamide biosynthesis II (eukaryotes):
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links