Difference between revisions of "RXN3O-178"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GABATRANSAM-RXN GABATRANSAM-RXN] == * direction: ** reversible * common-name: ** 4-aminobutyrate tr...")
 
(Created page with "Category:reaction == Reaction RXN3O-178 == * direction: ** left-to-right * common-name: ** sam:c-24 sterol methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GABATRANSAM-RXN GABATRANSAM-RXN] ==
+
== Reaction RXN3O-178 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 4-aminobutyrate transaminase
+
** sam:c-24 sterol methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.19 ec-2.6.1.19]
+
** [http://enzyme.expasy.org/EC/2.1.1.41 ec-2.1.1.41]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-AMINO-BUTYRATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[SUCC-S-ALD]][c]
+
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[ZYMOSTEROL]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[FECOSTEROL]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07892]]
+
* Gene: [[SJ05905]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09766]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUDEG-I-PWY]], GABA shunt: [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-I-PWY GLUDEG-I-PWY]
+
* [[PWY-6075]], ergosterol biosynthesis I:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6536]], 4-aminobutanoate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6536 PWY-6536]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6537]], 4-aminobutanoate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6537 PWY-6537]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5022]], 4-aminobutanoate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6535]], 4-aminobutanoate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6535 PWY-6535]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-4321]], L-glutamate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321]
 
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[P181-PWY]], nicotine degradation I (pyridine pathway): [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY]
 
−
** '''2''' reactions found over '''17''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR104270
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23355 23355]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21129 21129]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01648 R01648]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04427 R04427]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P22256 P22256]
+
** [http://www.uniprot.org/uniprot/P25087 P25087]
−
** [http://www.uniprot.org/uniprot/P50457 P50457]
+
** [http://www.uniprot.org/uniprot/Q39227 Q39227]
−
** [http://www.uniprot.org/uniprot/Q9UZ71 Q9UZ71]
+
** [http://www.uniprot.org/uniprot/O49215 O49215]
−
** [http://www.uniprot.org/uniprot/P50554 P50554]
+
** [http://www.uniprot.org/uniprot/O24153 O24153]
−
** [http://www.uniprot.org/uniprot/P80404 P80404]
+
** [http://www.uniprot.org/uniprot/O24154 O24154]
−
** [http://www.uniprot.org/uniprot/P14010 P14010]
+
** [http://www.uniprot.org/uniprot/P93852 P93852]
−
** [http://www.uniprot.org/uniprot/P17649 P17649]
+
** [http://www.uniprot.org/uniprot/Q43445 Q43445]
−
** [http://www.uniprot.org/uniprot/P40829 P40829]
+
** [http://www.uniprot.org/uniprot/Q41586 Q41586]
−
** [http://www.uniprot.org/uniprot/O13837 O13837]
+
** [http://www.uniprot.org/uniprot/O24328 O24328]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/O14321 O14321]
−
{{#set: common-name=4-aminobutyrate transaminase}}
+
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.6.1.19}}
+
{{#set: common-name=sam:c-24 sterol methyltransferase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-2.1.1.41}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN3O-178

  • direction:
    • left-to-right
  • common-name:
    • sam:c-24 sterol methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6075, ergosterol biosynthesis I:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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