Difference between revisions of "RXN66-320"
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(Created page with "Category:reaction == Reaction AKBLIG-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.29 ec-2.3.1.29] == Reaction formula == * 1 A...") |
(Created page with "Category:reaction == Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN == * direction: ** left-to-right * common-name: ** udp-xylose synthase * ec-number: ** [http://enzyme.expas...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * common-name: | ||
| + | ** udp-xylose synthase | ||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.1.1.35 ec-4.1.1.35] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[PROTON]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[UDP-D-XYLOSE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ10476]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ00231]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[ | + | * [[PWY-4821]], UDP-α-D-xylose biosynthesis: |
| − | ** '''2''' reactions found over ''' | + | ** '''2''' reactions found over '''1''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[orthology]]; source: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23917 23917] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01384 R01384] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
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| − | |||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: ec-number=ec- | + | {{#set: common-name=udp-xylose synthase}} |
| − | {{#set: nb gene associated= | + | {{#set: ec-number=ec-4.1.1.35}} |
| + | {{#set: nb gene associated=2}} | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
| − | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 19:07, 14 January 2021
Contents
Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN
- direction:
- left-to-right
- common-name:
- udp-xylose synthase
- ec-number:
Reaction formula
- 1 PROTON[c] + 1 UDP-GLUCURONATE[c] => 1 CARBON-DIOXIDE[c] + 1 UDP-D-XYLOSE[c]
Gene(s) associated with this reaction
- Gene: SJ10476
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ00231
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-4821, UDP-α-D-xylose biosynthesis:
- 2 reactions found over 1 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
