Difference between revisions of "RXN66-542"

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(Created page with "Category:reaction == Reaction RNA-LIGASE-ATP-RXN == * direction: ** left-to-right * common-name: ** rna ligase (atp) * ec-number: ** [http://enzyme.expasy.org/EC/6.5.1.3 e...")
(Created page with "Category:reaction == Reaction RXN66-542 == * direction: ** left-to-right * common-name: ** proline dehydrogenase == Reaction formula == * 1.0 PRO[c] '''+''' 1.0 Ubiq...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RNA-LIGASE-ATP-RXN ==
+
== Reaction RXN66-542 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** rna ligase (atp)
+
** proline dehydrogenase
* ec-number:
 
** [http://enzyme.expasy.org/EC/6.5.1.3 ec-6.5.1.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[3Prime-OH-Terminated-RNAs]][c] '''+''' 1 [[5-Phospho-RNA]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[RNA-Holder]][c]
+
* 1.0 [[PRO]][c] '''+''' 1.0 [[Ubiquinones]][c] '''=>''' 1.0 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[Ubiquinols]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ14703]]
+
* Gene: [[SJ09783]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ03634]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07640 R07640]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P00971 P00971]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=rna ligase (atp)}}
+
{{#set: common-name=proline dehydrogenase}}
{{#set: ec-number=ec-6.5.1.3}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN66-542

  • direction:
    • left-to-right
  • common-name:
    • proline dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links