Difference between revisions of "RXNQT-4142"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-21...")
(Created page with "Category:reaction == Reaction RXNQT-4142 == * direction: ** left-to-right * common-name: ** l-galactose-1-phosphate phosphatase * ec-number: ** [http://enzyme.expasy.org/E...")
 
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174] ==
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== Reaction RXNQT-4142 ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
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** left-to-right
 
* common-name:
 
* common-name:
** mevalonate pathway ii (archaea)
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** l-galactose-1-phosphate phosphatase
== Reaction(s) found ==
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* ec-number:
* [[1.1.1.34-RXN]]
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** [http://enzyme.expasy.org/EC/3.1.3.93 ec-3.1.3.93]
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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== Reaction formula ==
* [[HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN]]
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* 1 [[CPDQT-4]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-Galactopyranose]][c] '''+''' 1 [[Pi]][c]
* [[IPPISOM-RXN]]
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== Gene(s) associated with this reaction  ==
* [[MEVALONATE-KINASE-RXN]]
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* Gene: [[SJ20976]]
* [[RXN-10068]]
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** Category: [[annotation]]
== Reaction(s) not found ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10067 RXN-10067]
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** Category: [[orthology]]
{{#set: taxonomic-range=tax-2157}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
{{#set: common-name=mevalonate pathway ii (archaea)}}
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* Gene: [[SJ18979]]
{{#set: nb reaction found=6}}
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** Category: [[annotation]]
{{#set: completion rate=0.86}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
{{#set: nb total reaction=7}}
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ04955]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[PWY-882]], L-ascorbate biosynthesis I (plants, L-galactose pathway):
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** '''6''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR111269
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26350 26350]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07674 R07674]
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{{#set: direction=left-to-right}}
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{{#set: common-name=l-galactose-1-phosphate phosphatase}}
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{{#set: ec-number=ec-3.1.3.93}}
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{{#set: nb gene associated=3}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXNQT-4142

  • direction:
    • left-to-right
  • common-name:
    • l-galactose-1-phosphate phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-882, L-ascorbate biosynthesis I (plants, L-galactose pathway):
    • 6 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR111269
  • RHEA:
  • LIGAND-RXN: