Difference between revisions of "RXNQT-4142"

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(Created page with "Category:reaction == Reaction RXN-13139 == * direction: ** reversible * common-name: ** atp-dependent nadph-hydrate dehydratase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction RXN-12244 == * direction: ** left-to-right * common-name: ** 15-cis-phytoene desaturase ** 15,9'-di-cis phytofluene desaturase * synonymous:...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-13139 ==
+
== Reaction RXN-12244 ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** atp-dependent nadph-hydrate dehydratase
+
** 15-cis-phytoene desaturase
* ec-number:
+
** 15,9'-di-cis phytofluene desaturase
** [http://enzyme.expasy.org/EC/4.2.1.93 ec-4.2.1.93]
+
* synonymous:
 +
** plant-type phytoene desaturase
 +
** pds
 +
** phytoene desaturase (ambiguous)
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[CPD0-2474]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CPD-13171]][c] '''+''' 1 [[PLASTOQUINONE]][c] '''=>''' 1 [[CPD-7535]][c] '''+''' 1 [[Plastoquinols]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ04267]]
+
* Gene: [[SJ08891]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R10288 R10288]
 
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32231 32231]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30198 30198]
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
{{#set: common-name=atp-dependent nadph-hydrate dehydratase}}
+
{{#set: common-name=15-cis-phytoene desaturase|15,9'-di-cis phytofluene desaturase}}
{{#set: ec-number=ec-4.2.1.93}}
+
{{#set: synonymous=pds|plant-type phytoene desaturase|phytoene desaturase (ambiguous)}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:35, 5 January 2021

Reaction RXN-12244

  • direction:
    • left-to-right
  • common-name:
    • 15-cis-phytoene desaturase
    • 15,9'-di-cis phytofluene desaturase
  • synonymous:
    • plant-type phytoene desaturase
    • pds
    • phytoene desaturase (ambiguous)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6475, trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links