Difference between revisions of "S-2-HYDROXY-ACID-OXIDASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction THIAMIN-TRIPHOSPHATASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.28 ec-3.6.1.28] == Reaction fo...")
(Created page with "Category:reaction == Reaction RXN66-281 == * direction: ** left-to-right * common-name: ** squalene synthase ** farnesyl-diphosphate farnesyltransferase ** presqualene dip...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction THIAMIN-TRIPHOSPHATASE-RXN ==
+
== Reaction RXN66-281 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec-number:
+
* common-name:
−
** [http://enzyme.expasy.org/EC/3.6.1.28 ec-3.6.1.28]
+
** squalene synthase
 +
** farnesyl-diphosphate farnesyltransferase
 +
** presqualene diphosphate:farnesyl-diphosphate farnesyltransferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-611]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c]
+
* 1 [[CPD-465]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[SQUALENE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08883]]
+
* Gene: [[SJ13532]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02885]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7369]], thiamine triphosphate metabolism:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11745 11745]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00618 R00618]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02872 R02872]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-3.6.1.28}}
+
{{#set: common-name=squalene synthase|farnesyl-diphosphate farnesyltransferase|presqualene diphosphate:farnesyl-diphosphate farnesyltransferase}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:06, 5 January 2021

Reaction RXN66-281

  • direction:
    • left-to-right
  • common-name:
    • squalene synthase
    • farnesyl-diphosphate farnesyltransferase
    • presqualene diphosphate:farnesyl-diphosphate farnesyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=S-2-HYDROXY-ACID-OXIDASE-RXN&oldid=64258"