Difference between revisions of "SAICARSYN-RXN"

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(Created page with "Category:reaction == Reaction RXN-8309 == * direction: ** left-to-right * common-name: ** 1-18:3-2-16:2-monogalactosyldiacylglycerol desaturase * ec-number: ** [http://enz...")
(Created page with "Category:reaction == Reaction GLUTAMATESYN-RXN == * direction: ** left-to-right * common-name: ** l-glutamate:nadp+ oxidoreductase (transaminating) * ec-number: ** [http:/...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8309 ==
+
== Reaction GLUTAMATESYN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 1-18:3-2-16:2-monogalactosyldiacylglycerol desaturase
+
** l-glutamate:nadp+ oxidoreductase (transaminating)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.19.35 ec-1.14.19.35]
+
** [http://enzyme.expasy.org/EC/1.4.1.13 ec-1.4.1.13]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-8078]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD-2190]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[GLT]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03069]]
+
* Gene: [[SJ20190]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ09228]]
+
* Gene: [[SJ10812]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10813]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04922]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-782]], glycolipid desaturation:
+
* [[GLUTSYN-PWY]], L-glutamate biosynthesis I:
−
** '''16''' reactions found over '''28''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[GLUTAMINEFUM-PWY]], L-glutamine degradation II:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15503 15503]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00114 R00114]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q05756 Q05756]
 +
** [http://www.uniprot.org/uniprot/Q05755 Q05755]
 +
** [http://www.uniprot.org/uniprot/Q9PJA4 Q9PJA4]
 +
** [http://www.uniprot.org/uniprot/Q9PJA2 Q9PJA2]
 +
** [http://www.uniprot.org/uniprot/Q9CG25 Q9CG25]
 +
** [http://www.uniprot.org/uniprot/Q58746 Q58746]
 +
** [http://www.uniprot.org/uniprot/P09831 P09831]
 +
** [http://www.uniprot.org/uniprot/Q9CG24 Q9CG24]
 +
** [http://www.uniprot.org/uniprot/P09832 P09832]
 +
** [http://www.uniprot.org/uniprot/P39812 P39812]
 +
** [http://www.uniprot.org/uniprot/Q9S2Y9 Q9S2Y9]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1-18:3-2-16:2-monogalactosyldiacylglycerol desaturase}}
+
{{#set: common-name=l-glutamate:nadp+ oxidoreductase (transaminating)}}
−
{{#set: ec-number=ec-1.14.19.35}}
+
{{#set: ec-number=ec-1.4.1.13}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:06, 14 January 2021

Reaction GLUTAMATESYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • l-glutamate:nadp+ oxidoreductase (transaminating)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLUTSYN-PWY, L-glutamate biosynthesis I:
    • 1 reactions found over 1 reactions in the full pathway
  • GLUTAMINEFUM-PWY, L-glutamine degradation II:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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