Difference between revisions of "SAICARSYN-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6104 PWY-6104] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
(Created page with "Category:reaction == Reaction SAICARSYN-RXN == * direction: ** left-to-right * common-name: ** phosphoribosylaminoimidazole-succinocarboxamide synthase * ec-number: ** [ht...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6104 PWY-6104] ==
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== Reaction SAICARSYN-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
 
* common-name:
 
* common-name:
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** 3-chlorotoluene degradation ii
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** phosphoribosylaminoimidazole-succinocarboxamide synthase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-9910]]
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** [http://enzyme.expasy.org/EC/6.3.2.6 ec-6.3.2.6]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9909 RXN-9909]
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* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9908 RXN-9908]
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== Gene(s) associated with this reaction  ==
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{{#set: taxonomic-range=tax-2}}
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* Gene: [[SJ13173]]
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{{#set: common-name=3-chlorotoluene degradation ii}}
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** Category: [[annotation]]
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{{#set: nb reaction found=1}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: completion rate=0.33}}
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** Category: [[orthology]]
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{{#set: nb total reaction=3}}
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[PWY-6124]], inosine-5'-phosphate biosynthesis II:
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6123]], inosine-5'-phosphate biosynthesis I:
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7234]], inosine-5'-phosphate biosynthesis III:
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR108987
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22628 22628]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04591 R04591]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q07296 Q07296]
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** [http://www.uniprot.org/uniprot/Q9PHZ9 Q9PHZ9]
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** [http://www.uniprot.org/uniprot/P0A7D7 P0A7D7]
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** [http://www.uniprot.org/uniprot/P12046 P12046]
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** [http://www.uniprot.org/uniprot/Q58987 Q58987]
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** [http://www.uniprot.org/uniprot/Q9JV73 Q9JV73]
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** [http://www.uniprot.org/uniprot/P50124 P50124]
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** [http://www.uniprot.org/uniprot/P27602 P27602]
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** [http://www.uniprot.org/uniprot/P27616 P27616]
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** [http://www.uniprot.org/uniprot/P22234 P22234]
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** [http://www.uniprot.org/uniprot/P73471 P73471]
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** [http://www.uniprot.org/uniprot/Q9R7D5 Q9R7D5]
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{{#set: direction=left-to-right}}
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{{#set: common-name=phosphoribosylaminoimidazole-succinocarboxamide synthase}}
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{{#set: ec-number=ec-6.3.2.6}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction SAICARSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphoribosylaminoimidazole-succinocarboxamide synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6124, inosine-5'-phosphate biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6123, inosine-5'-phosphate biosynthesis I:
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7234, inosine-5'-phosphate biosynthesis III:
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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