Difference between revisions of "SAICARSYN-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-8309 == * direction: ** left-to-right * common-name: ** 1-18:3-2-16:2-monogalactosyldiacylglycerol desaturase * ec-number: ** [http://enz...")
(Created page with "Category:reaction == Reaction SAICARSYN-RXN == * direction: ** left-to-right * common-name: ** phosphoribosylaminoimidazole-succinocarboxamide synthase * ec-number: ** [ht...")
 
(3 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8309 ==
+
== Reaction SAICARSYN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 1-18:3-2-16:2-monogalactosyldiacylglycerol desaturase
+
** phosphoribosylaminoimidazole-succinocarboxamide synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.19.35 ec-1.14.19.35]
+
** [http://enzyme.expasy.org/EC/6.3.2.6 ec-6.3.2.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-8078]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD-2190]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03069]]
+
* Gene: [[SJ13173]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ09228]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-782]], glycolipid desaturation:
+
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II:
−
** '''16''' reactions found over '''28''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I:
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR108987
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22628 22628]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04591 R04591]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q07296 Q07296]
 +
** [http://www.uniprot.org/uniprot/Q9PHZ9 Q9PHZ9]
 +
** [http://www.uniprot.org/uniprot/P0A7D7 P0A7D7]
 +
** [http://www.uniprot.org/uniprot/P12046 P12046]
 +
** [http://www.uniprot.org/uniprot/Q58987 Q58987]
 +
** [http://www.uniprot.org/uniprot/Q9JV73 Q9JV73]
 +
** [http://www.uniprot.org/uniprot/P50124 P50124]
 +
** [http://www.uniprot.org/uniprot/P27602 P27602]
 +
** [http://www.uniprot.org/uniprot/P27616 P27616]
 +
** [http://www.uniprot.org/uniprot/P22234 P22234]
 +
** [http://www.uniprot.org/uniprot/P73471 P73471]
 +
** [http://www.uniprot.org/uniprot/Q9R7D5 Q9R7D5]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1-18:3-2-16:2-monogalactosyldiacylglycerol desaturase}}
+
{{#set: common-name=phosphoribosylaminoimidazole-succinocarboxamide synthase}}
−
{{#set: ec-number=ec-1.14.19.35}}
+
{{#set: ec-number=ec-6.3.2.6}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction SAICARSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphoribosylaminoimidazole-succinocarboxamide synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6124, inosine-5'-phosphate biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6123, inosine-5'-phosphate biosynthesis I:
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7234, inosine-5'-phosphate biosynthesis III:
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SAICARSYN-RXN&oldid=142660"