Difference between revisions of "SJ01444"

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(Created page with "Category:gene == Gene SJ00971 == * transcription-direction: ** positive * right-end-position: ** 103211 * left-end-position: ** 98279 * centisome-position: ** 61.839474...")
(Created page with "Category:gene == Gene SJ01444 == * transcription-direction: ** negative * right-end-position: ** 107419 * left-end-position: ** 98964 * centisome-position: ** 65.49483...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ00971 ==
+
== Gene SJ01444 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 103211
+
** 107419
 
* left-end-position:
 
* left-end-position:
** 98279
+
** 98964
 
* centisome-position:
 
* centisome-position:
** 61.839474    
+
** 65.49483    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
* [[DIHYDLIPACETRANS-RXN]]
+
* [[1.1.1.178-RXN]]
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[PYRUVDEH-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[1.1.1.51-RXN]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-12508]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-12583]]
+
* [[7-ALPHA-HYDROXYSTEROID-DEH-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN0-1132]]
+
* [[ESTRADIOL-17-BETA-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN0-1133]]
+
* [[OHACYL-COA-DEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN0-1134]]
+
* [[RXN-10698]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10702]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10703]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11245]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11662]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12490]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12560]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12570]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12705]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12750]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13279]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16033]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16133]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17777]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17781]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17786]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17790]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17793]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17794]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17797]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17798]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-5901]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7698]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-905]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-2044]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
** '''3''' reactions found over '''1''' reactions in the full pathway
+
* [[ILEUDEG-PWY]]
* [[PWY-7218]]
+
** '''5''' reactions found over '''6''' reactions in the full pathway
** '''7''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-5109]]
* [[PWY-5482]]
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6943]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
* [[PWY-5537]]
+
* [[PWY-6518]]
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
* [[PWY-6886]]
+
* [[PWY66-380]]
** '''8''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
* [[PWY-7384]]
+
* [[PWY-5136]]
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
* [[PYRUVDEHYD-PWY]]
+
* [[FAO-PWY]]
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
{{#set: transcription-direction=positive}}
+
* [[PWY66-391]]
{{#set: right-end-position=103211}}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
{{#set: left-end-position=98279}}
+
* [[PWY-7007]]
{{#set: centisome-position=61.839474   }}
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-735]]
 +
** '''16''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-6435]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5789]]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-7779]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5177]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7778]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6863]]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[CENTFERM-PWY]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6583]]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6883]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[P162-PWY]]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7216]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7401]]
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-7094]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7948]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6946]]
 +
** '''6''' reactions found over '''22''' reactions in the full pathway
 +
* [[PWY-6945]]
 +
** '''5''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-6944]]
 +
** '''2''' reactions found over '''25''' reactions in the full pathway
 +
* [[PWY-7588]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY1-3]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5741]]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5676]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5080]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-81]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY0-321]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-1361]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=107419}}
 +
{{#set: left-end-position=98964}}
 +
{{#set: centisome-position=65.49483   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=30}}
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=35}}

Latest revision as of 11:09, 18 March 2021

Gene SJ01444

  • transcription-direction:
    • negative
  • right-end-position:
    • 107419
  • left-end-position:
    • 98964
  • centisome-position:
    • 65.49483

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • ILEUDEG-PWY
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5109
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6943
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6518
    • 1 reactions found over 6 reactions in the full pathway
  • PWY66-380
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY66-391
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7007
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway
  • PWY-6435
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-7779
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5177
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7778
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-6863
    • 9 reactions found over 11 reactions in the full pathway
  • CENTFERM-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6583
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-6883
    • 5 reactions found over 6 reactions in the full pathway
  • P162-PWY
    • 7 reactions found over 10 reactions in the full pathway
  • PWY-7216
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7401
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-7094
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7948
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-6946
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6945
    • 5 reactions found over 17 reactions in the full pathway
  • PWY-6944
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-7588
    • 1 reactions found over 2 reactions in the full pathway
  • PWY1-3
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5741
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-5676
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5080
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-81
    • 2 reactions found over 6 reactions in the full pathway
  • PWY0-321
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-1361
    • 2 reactions found over 7 reactions in the full pathway