Difference between revisions of "SJ02145"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ACET ACET] == * common-name: ** acetate * smiles: ** cc([o-])=o * inchi-key: ** qtbsbxvteameqo-...")
 
(Created page with "Category:gene == Gene SJ08856 == * transcription-direction: ** positive * right-end-position: ** 32704 * left-end-position: ** 17301 * centisome-position: ** 36.001 ==...")
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ACET ACET] ==
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== Gene SJ08856 ==
* common-name:
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* transcription-direction:
** acetate
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** positive
* smiles:
+
* right-end-position:
** cc([o-])=o
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** 32704
* inchi-key:
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* left-end-position:
** qtbsbxvteameqo-uhfffaoysa-m
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** 17301
* molecular-weight:
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* centisome-position:
** 59.044
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** 36.001   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[ACECOATRANS-RXN-CPD-10280/ACET//TETRACOSANOATE/ACETYL-COA.42.]]
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* [[S.japonica_carotenoid_curated]]
* [[ACECOATRANS-RXN-CPD-14717/ACET//R-2-HYDROXYSTEARATE/ACETYL-COA.47.]]
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== Reaction(s) associated ==
* [[ACECOATRANS-RXN-CPD-196/ACET//CPD-195/ACETYL-COA.33.]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
* [[ACECOATRANS-RXN-HEXANOYL-COA/ACET//HEXANOATE/ACETYL-COA.40.]]
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* [[ATP-ADENYLYLTRANSFERASE-RXN]]
* [[ACETATE--COA-LIGASE-RXN]]
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** Category: [[annotation]]
* [[ACETYLHOMOSER-CYS-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[ACETYLORNDEACET-RXN]]
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** Category: [[orthology]]
* [[ACSERLY-RXN]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* [[SULFOCYS-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
== Reaction(s) known to produce the compound ==
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* [[DCTP-PYROPHOSPHATASE-RXN]]
* [[3.1.1.47-RXN]]
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** Category: [[annotation]]
* [[3.1.1.56-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[3.1.1.69-RXN]]
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* [[DUTP-PYROP-RXN]]
* [[3.5.1.98-RXN]]
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** Category: [[annotation]]
* [[ACETYLCHOLINESTERASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[ACETYLHOMOSER-CYS-RXN]]
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* [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]]
* [[ACETYLORNDEACET-RXN]]
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** Category: [[annotation]]
* [[ACHMSSELCYSL]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[ACHMSSELCYSLh]]
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* [[RXN-14139]]
* [[ACSERLY-RXN]]
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** Category: [[annotation]]
* [[AODAA]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[ARYLESTERASE-RXN]]
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* [[RXN-14140]]
* [[CHITIN-DEACETYLASE-RXN]]
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** Category: [[annotation]]
* [[RXN-12726]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-13684]]
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* [[RXN0-383]]
* [[RXN-14728]]
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** Category: [[annotation]]
* [[RXN-7933]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN66-3]]
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* [[RXN0-384]]
* [[SULFOCYS-RXN]]
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** Category: [[annotation]]
== Reaction(s) of unknown directionality ==
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: common-name=acetate}}
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* [[RXN0-385]]
{{#set: inchi-key=inchikey=qtbsbxvteameqo-uhfffaoysa-m}}
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** Category: [[annotation]]
{{#set: molecular-weight=59.044}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5107]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-6382]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SULFATE-ADENYLYLTRANSFERASE-ADP-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-7206]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7187]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY0-166]]
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** '''14''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7821]]
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** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5279]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=32704}}
 +
{{#set: left-end-position=17301}}
 +
{{#set: centisome-position=36.001    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=12}}
 +
{{#set: nb pathway associated=7}}

Revision as of 14:20, 26 August 2019

Gene SJ08856

  • transcription-direction:
    • positive
  • right-end-position:
    • 32704
  • left-end-position:
    • 17301
  • centisome-position:
    • 36.001

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7206
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7187
    • 6 reactions found over 7 reactions in the full pathway
  • PWY0-166
    • 14 reactions found over 13 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7821
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-5279
    • 2 reactions found over 2 reactions in the full pathway