Difference between revisions of "SJ02694"

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(Created page with "Category:gene == Gene SJ05616 == * transcription-direction: ** positive * right-end-position: ** 346548 * left-end-position: ** 334298 * centisome-position: ** 67.715385...")
(Created page with "Category:gene == Gene SJ02694 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-14971 ** Category:...")
 
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[[Category:gene]]
 
[[Category:gene]]
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== Gene SJ05616 ==
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== Gene SJ02694 ==
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* transcription-direction:
 
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** positive
 
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* right-end-position:
 
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** 346548
 
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* left-end-position:
 
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** 334298
 
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* centisome-position:
 
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** 67.715385   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 +
* [[RXN-14971]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15378]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SUCDHm]]
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** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[1.1.1.145-RXN]]
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* [[PWY-6969]]
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** Category: [[annotation]]
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** '''10''' reactions found over '''9''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-5690]]
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* [[NADH-DEHYDROGENASE-RXN]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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** Category: [[annotation]]
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* [[P105-PWY]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''10''' reactions found over '''9''' reactions in the full pathway
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* [[RXN-12693]]
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* [[TCA]]
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** Category: [[annotation]]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-7254]]
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* [[RXN-12747]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY-561]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''6''' reactions found over '''4''' reactions in the full pathway
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* [[RXN-12789]]
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* [[PWY-6728]]
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** Category: [[annotation]]
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** '''11''' reactions found over '''19''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-3781]]
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* [[RXN66-342]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY-7279]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[RXN66-350]]
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* [[PWY0-1353]]
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** Category: [[annotation]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY66-398]]
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* [[RXN66-353]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY-4302]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1329]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
</div>
 
</div>
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== Pathway(s) associated ==
 
−
* [[PWY-6946]]
 
−
** '''6''' reactions found over '''22''' reactions in the full pathway
 
−
* [[PWY-6944]]
 
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** '''2''' reactions found over '''25''' reactions in the full pathway
 
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* [[PWY-6948]]
 
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** '''2''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY66-378]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7299]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=346548}}
 
−
{{#set: left-end-position=334298}}
 
−
{{#set: centisome-position=67.715385    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=8}}
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{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=13}}

Latest revision as of 11:04, 18 March 2021

Gene SJ02694

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6969
    • 10 reactions found over 9 reactions in the full pathway
  • PWY-5690
    • 8 reactions found over 9 reactions in the full pathway
  • P105-PWY
    • 10 reactions found over 9 reactions in the full pathway
  • TCA
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-7254
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-561
    • 6 reactions found over 4 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway
  • PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7279
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1353
    • 1 reactions found over 2 reactions in the full pathway
  • PWY66-398
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-4302
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1329
    • 1 reactions found over 2 reactions in the full pathway


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