Difference between revisions of "SJ03000"

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(Created page with "Category:gene == Gene SJ01235 == * transcription-direction: ** positive * right-end-position: ** 288573 * left-end-position: ** 277182 * centisome-position: ** 50.088184...")
(Created page with "Category:gene == Gene SJ03000 == * transcription-direction: ** positive * right-end-position: ** 39592 * left-end-position: ** 30155 * centisome-position: ** 23.84492...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ01235 ==
+
== Gene SJ03000 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 288573
+
** 39592
 
* left-end-position:
 
* left-end-position:
** 277182
+
** 30155
 
* centisome-position:
 
* centisome-position:
** 50.088184    
+
** 23.84492    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[DOPAMINE-BETA-MONOOXYGENASE-RXN]]
* [[3.1.1.23-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[3.1.1.64-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[CARBOXYLESTERASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10711]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10767]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12252]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12575]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15088]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15089]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXNQT-4366]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[LIPAS-PWY]]
+
* [[PWY66-301]]
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
* [[PWY-6303]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6857]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7420]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=288573}}
+
{{#set: right-end-position=39592}}
{{#set: left-end-position=277182}}
+
{{#set: left-end-position=30155}}
{{#set: centisome-position=50.088184   }}
+
{{#set: centisome-position=23.84492   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=11}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:04, 18 March 2021

Gene SJ03000

  • transcription-direction:
    • positive
  • right-end-position:
    • 39592
  • left-end-position:
    • 30155
  • centisome-position:
    • 23.84492

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-301
    • 2 reactions found over 4 reactions in the full pathway