Difference between revisions of "SJ03005"

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(Created page with "Category:gene == Gene SJ03174 == * transcription-direction: ** negative * right-end-position: ** 37192 * left-end-position: ** 27897 * centisome-position: ** 22.453398...")
(Created page with "Category:gene == Gene SJ14819 == * transcription-direction: ** positive * right-end-position: ** 330341 * left-end-position: ** 302690 * centisome-position: ** 75.42285...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03174 ==
+
== Gene SJ14819 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 37192
+
** 330341
 
* left-end-position:
 
* left-end-position:
−
** 27897
+
** 302690
 
* centisome-position:
 
* centisome-position:
−
** 22.453398    
+
** 75.42285    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
Line 19: Line 19:
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
+
* [[PHOSPHOLIPASE-A1-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 31: Line 31:
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12086]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-12252]]
 
* [[RXN-12252]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12430]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12575]]
 
* [[RXN-12575]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12579]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-6952]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 40: Line 52:
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[TRNA-CHARGING-PWY]]
+
* [[LIPASYN-PWY]]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6803]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6303]]
 
* [[PWY-6303]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6857]]
 
* [[PWY-6857]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
** '''3''' reactions found over '''7''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[LIPAS-PWY]]
−
{{#set: right-end-position=37192}}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=27897}}
+
{{#set: transcription-direction=positive}}
−
{{#set: centisome-position=22.453398   }}
+
{{#set: right-end-position=330341}}
 +
{{#set: left-end-position=302690}}
 +
{{#set: centisome-position=75.42285   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=14}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=5}}

Revision as of 11:04, 15 January 2021

Gene SJ14819

  • transcription-direction:
    • positive
  • right-end-position:
    • 330341
  • left-end-position:
    • 302690
  • centisome-position:
    • 75.42285

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • LIPASYN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6803
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • LIPAS-PWY
    • 2 reactions found over 3 reactions in the full pathway




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