Difference between revisions of "SJ03005"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-253 CPD-253] == * common-name: ** 4,5-seco-dopa * smiles: ** c(=o)c=c(cc([n+])c(=o)[o-])c=c...")
(Created page with "Category:gene == Gene SJ09205 == * transcription-direction: ** negative * right-end-position: ** 161146 * left-end-position: ** 156111 * centisome-position: ** 36.861404...")
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-253 CPD-253] ==
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== Gene SJ09205 ==
* common-name:
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* transcription-direction:
** 4,5-seco-dopa
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** negative
* smiles:
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* right-end-position:
** c(=o)c=c(cc([n+])c(=o)[o-])c=c(c([o-])=o)o
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** 161146
* inchi-key:
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* left-end-position:
** fnegjfdtwwxqes-qtwonppnsa-m
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** 156111
* molecular-weight:
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* centisome-position:
** 228.181
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** 36.861404   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
== Reaction(s) known to produce the compound ==
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* [[S.japonica_sterols_curated]]
* [[RXN-8460]]
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== Reaction(s) associated ==
== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
{{#set: common-name=4,5-seco-dopa}}
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* [[3.1.1.64-RXN]]
{{#set: inchi-key=inchikey=fnegjfdtwwxqes-qtwonppnsa-m}}
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** Category: [[annotation]]
{{#set: molecular-weight=228.181}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[CARBOXYLESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10711]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10767]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12086]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12252]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12575]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12579]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXNQT-4366]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[TRIACYLGLYCEROL-LIPASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
 +
* [[PWY-6303]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6857]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[LIPAS-PWY]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
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{{#set: right-end-position=161146}}
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{{#set: left-end-position=156111}}
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{{#set: centisome-position=36.861404    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=11}}
 +
{{#set: nb pathway associated=3}}

Revision as of 20:21, 18 December 2020

Gene SJ09205

  • transcription-direction:
    • negative
  • right-end-position:
    • 161146
  • left-end-position:
    • 156111
  • centisome-position:
    • 36.861404

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • LIPAS-PWY
    • 2 reactions found over 3 reactions in the full pathway