Difference between revisions of "SJ03223"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14274 CPD-14274] == * common-name: ** 3-oxo-cerotoyl-coa * smiles: ** ccccccccccccccccccccc...")
(Created page with "Category:gene == Gene SJ03223 == * transcription-direction: ** negative * right-end-position: ** 127010 * left-end-position: ** 122576 * centisome-position: ** 23.208998...")
 
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14274 CPD-14274] ==
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== Gene SJ03223 ==
* common-name:
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* transcription-direction:
** 3-oxo-cerotoyl-coa
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** negative
* smiles:
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* right-end-position:
** cccccccccccccccccccccccc(=o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
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** 127010
* inchi-key:
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* left-end-position:
** vomuifobqmyjpj-cpigopahsa-j
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** 122576
* molecular-weight:
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* centisome-position:
** 1156.166
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** 23.208998   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[RXN-13301]]
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* [[S.japonica_carotenoid_curated]]
== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
* [[RXN-13296]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
== Reaction(s) of unknown directionality ==
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* [[RXN-12587]]
{{#set: common-name=3-oxo-cerotoyl-coa}}
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** Category: [[annotation]]
{{#set: inchi-key=inchikey=vomuifobqmyjpj-cpigopahsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: molecular-weight=1156.166}}
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* [[RXN-12588]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14382]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14384]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14385]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14386]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15881]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9787]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-308]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[SELENOCYSTEINE-LYASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-6892]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7250]]
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** '''5''' reactions found over '''10''' reactions in the full pathway
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* [[PWY0-1021]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7892]]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-6891]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7904]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7891]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7889]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7888]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6823]]
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** '''7''' reactions found over '''6''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=127010}}
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{{#set: left-end-position=122576}}
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{{#set: centisome-position=23.208998    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=10}}
 +
{{#set: nb pathway associated=10}}

Latest revision as of 11:00, 18 March 2021

Gene SJ03223

  • transcription-direction:
    • negative
  • right-end-position:
    • 127010
  • left-end-position:
    • 122576
  • centisome-position:
    • 23.208998

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6892
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7250
    • 5 reactions found over 10 reactions in the full pathway
  • PWY0-1021
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7892
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-6891
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7904
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7891
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7889
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7888
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6823
    • 7 reactions found over 6 reactions in the full pathway