Difference between revisions of "SJ05905"

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(Created page with "Category:gene == Gene SJ22223 == * transcription-direction: ** positive * right-end-position: ** 88755 * left-end-position: ** 48960 * centisome-position: ** 27.30208...")
(Created page with "Category:gene == Gene SJ05905 == * transcription-direction: ** positive * right-end-position: ** 43412 * left-end-position: ** 34137 * centisome-position: ** 39.46337...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22223 ==
+
== Gene SJ05905 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 88755
+
** 43412
 
* left-end-position:
 
* left-end-position:
−
** 48960
+
** 34137
 
* centisome-position:
 
* centisome-position:
−
** 27.30208    
+
** 39.46337    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ASPARTATEKIN-RXN]]
+
* [[RXN-4021]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN3O-178]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[HOMOSERDEHYDROG-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5097]]
+
* [[PWY-2541]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''11''' reactions found over '''35''' reactions in the full pathway
−
* [[PWY-6559]]
+
* [[PWY-7155]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[P101-PWY]]
+
* [[PWY-6075]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[DAPLYSINESYN-PWY]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2941]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2942]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6562]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7153]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[HOMOSERSYN-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=88755}}
+
{{#set: right-end-position=43412}}
−
{{#set: left-end-position=48960}}
+
{{#set: left-end-position=34137}}
−
{{#set: centisome-position=27.30208   }}
+
{{#set: centisome-position=39.46337   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:07, 18 March 2021

Gene SJ05905

  • transcription-direction:
    • positive
  • right-end-position:
    • 43412
  • left-end-position:
    • 34137
  • centisome-position:
    • 39.46337

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2541
    • 11 reactions found over 35 reactions in the full pathway
  • PWY-7155
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6075
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05905&oldid=134863"