Difference between revisions of "SJ05905"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ22223 == * transcription-direction: ** positive * right-end-position: ** 88755 * left-end-position: ** 48960 * centisome-position: ** 27.30208...")
(Created page with "Category:gene == Gene SJ00669 == * transcription-direction: ** negative * right-end-position: ** 154563 * left-end-position: ** 148234 * centisome-position: ** 90.49915...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22223 ==
+
== Gene SJ00669 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 88755
+
** 154563
 
* left-end-position:
 
* left-end-position:
−
** 48960
+
** 148234
 
* centisome-position:
 
* centisome-position:
−
** 27.30208    
+
** 90.49915    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ASPARTATEKIN-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ENTDB-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[HOMOSERDEHYDROG-RXN]]
+
* [[HOLO-ACP-SYNTH-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-10994]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15889]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-16759]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5097]]
+
* [[ENTBACSYN-PWY]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6559]]
+
* [[PWY-6012]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[P101-PWY]]
+
* [[PWY-6012-1]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[DAPLYSINESYN-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=154563}}
−
* [[PWY-2941]]
+
{{#set: left-end-position=148234}}
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=90.49915   }}
−
* [[PWY-2942]]
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
{{#set: nb reaction associated=5}}
−
* [[PWY-6562]]
+
{{#set: nb pathway associated=3}}
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7153]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[HOMOSERSYN-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=88755}}
 
−
{{#set: left-end-position=48960}}
 
−
{{#set: centisome-position=27.30208   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=2}}
 
−
{{#set: nb pathway associated=9}}
 

Revision as of 20:25, 18 December 2020

Gene SJ00669

  • transcription-direction:
    • negative
  • right-end-position:
    • 154563
  • left-end-position:
    • 148234
  • centisome-position:
    • 90.49915

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • ENTBACSYN-PWY
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-6012
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6012-1
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05905&oldid=43679"