Difference between revisions of "SJ06016"

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(Created page with "Category:gene == Gene SJ03199 == * transcription-direction: ** positive * right-end-position: ** 62481 * left-end-position: ** 39163 * centisome-position: ** 31.588667...")
(Created page with "Category:gene == Gene SJ06016 == * transcription-direction: ** negative * right-end-position: ** 56046 * left-end-position: ** 25972 * centisome-position: ** 30.529795...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ03199 ==
+
== Gene SJ06016 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 62481
+
** 56046
 
* left-end-position:
 
* left-end-position:
** 39163
+
** 25972
 
* centisome-position:
 
* centisome-position:
** 31.588667    
+
** 30.529795    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[THREONINE--TRNA-LIGASE-RXN]]
+
* [[2.3.1.45-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[RXN-7864]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
== Pathway(s) associated ==
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[TRNA-CHARGING-PWY]]
+
{{#set: transcription-direction=negative}}
** '''21''' reactions found over '''21''' reactions in the full pathway
+
{{#set: right-end-position=56046}}
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=25972}}
{{#set: right-end-position=62481}}
+
{{#set: centisome-position=30.529795   }}
{{#set: left-end-position=39163}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: centisome-position=31.588667   }}
+
{{#set: nb reaction associated=2}}
{{#set: organism associated=S.japonica_sterols_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb pathway associated=1}}
 

Latest revision as of 11:02, 18 March 2021

Gene SJ06016

  • transcription-direction:
    • negative
  • right-end-position:
    • 56046
  • left-end-position:
    • 25972
  • centisome-position:
    • 30.529795

Organism(s) associated with this gene

Reaction(s) associated