Difference between revisions of "SJ06016"

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(Created page with "Category:gene == Gene SJ00173 == * transcription-direction: ** negative * right-end-position: ** 60261 * left-end-position: ** 46978 * centisome-position: ** 27.521765...")
(Created page with "Category:gene == Gene SJ06016 == * transcription-direction: ** negative * right-end-position: ** 56046 * left-end-position: ** 25972 * centisome-position: ** 30.529795...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ00173 ==
+
== Gene SJ06016 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
** 60261
+
** 56046
 
* left-end-position:
 
* left-end-position:
** 46978
+
** 25972
 
* centisome-position:
 
* centisome-position:
** 27.521765    
+
** 30.529795    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[FPPS]]
+
* [[2.3.1.45-RXN]]
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[FPPSYN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[RXN-7864]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[GPPSYN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* [[PWY-6859]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7736]]
 
** '''3''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7102]]
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7721]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5123]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6383]]
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7410]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5122]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
* [[PWY-7141]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7659]]
 
** '''1''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-7709]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7182]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
{{#set: right-end-position=60261}}
+
{{#set: right-end-position=56046}}
{{#set: left-end-position=46978}}
+
{{#set: left-end-position=25972}}
{{#set: centisome-position=27.521765   }}
+
{{#set: centisome-position=30.529795   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=12}}
 

Latest revision as of 11:02, 18 March 2021

Gene SJ06016

  • transcription-direction:
    • negative
  • right-end-position:
    • 56046
  • left-end-position:
    • 25972
  • centisome-position:
    • 30.529795

Organism(s) associated with this gene

Reaction(s) associated