Difference between revisions of "SJ06465"

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(Created page with "Category:gene == Gene SJ04728 == * transcription-direction: ** positive * right-end-position: ** 315846 * left-end-position: ** 308870 * centisome-position: ** 61.02703...")
(Created page with "Category:gene == Gene SJ03726 == * transcription-direction: ** negative * right-end-position: ** 377568 * left-end-position: ** 361674 * centisome-position: ** 69.56674...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ04728 ==
+
== Gene SJ03726 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 315846
+
** 377568
 
* left-end-position:
 
* left-end-position:
** 308870
+
** 361674
 
* centisome-position:
 
* centisome-position:
** 61.02703    
+
** 69.56674    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[PHOSACETYLTRANS-RXN]]
+
* [[RXN-15561]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7511]]
* [[PWY-5482]]
+
** '''7''' reactions found over '''9''' reactions in the full pathway
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
* [[PWY0-1312]]
+
{{#set: right-end-position=377568}}
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: left-end-position=361674}}
* [[P122-PWY]]
+
{{#set: centisome-position=69.56674   }}
** '''16''' reactions found over '''18''' reactions in the full pathway
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
* [[P163-PWY]]
+
{{#set: nb reaction associated=2}}
** '''3''' reactions found over '''10''' reactions in the full pathway
+
{{#set: nb pathway associated=1}}
* [[PWY-5485]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[FERMENTATION-PWY]]
 
** '''11''' reactions found over '''16''' reactions in the full pathway
 
* [[P3-PWY]]
 
** '''3''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY4LZ-257]]
 
** '''7''' reactions found over '''7''' reactions in the full pathway
 
* [[METH-ACETATE-PWY]]
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-1281]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6637]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[P161-PWY]]
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-5497]]
 
** '''10''' reactions found over '''24''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=315846}}
 
{{#set: left-end-position=308870}}
 
{{#set: centisome-position=61.02703   }}
 
{{#set: organism associated=S.japonica_sterols_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb pathway associated=13}}
 

Revision as of 14:52, 5 January 2021

Gene SJ03726

  • transcription-direction:
    • negative
  • right-end-position:
    • 377568
  • left-end-position:
    • 361674
  • centisome-position:
    • 69.56674

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway