Difference between revisions of "SJ07762"

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(Created page with "Category:gene == Gene SJ21564 == * transcription-direction: ** positive * right-end-position: ** 372873 * left-end-position: ** 368358 * centisome-position: ** 61.890495...")
(Created page with "Category:gene == Gene SJ07762 == * transcription-direction: ** negative * right-end-position: ** 33939 * left-end-position: ** 27138 * centisome-position: ** 43.40205...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21564 ==
+
== Gene SJ07762 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 372873
+
** 33939
 
* left-end-position:
 
* left-end-position:
−
** 368358
+
** 27138
 
* centisome-position:
 
* centisome-position:
−
** 61.890495    
+
** 43.40205    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN]]
+
* [[CARBODEHYDRAT-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-5224]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[LEU-DEG2-PWY]]
+
* [[PWY-7115]]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY66-367]]
+
* [[PWY-7117]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''10''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-5074]]
+
* [[PWY-6142]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''10''' reactions found over '''13''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-5744]]
−
{{#set: right-end-position=372873}}
+
** '''4''' reactions found over '''13''' reactions in the full pathway
−
{{#set: left-end-position=368358}}
+
* [[PWYQT-4429]]
−
{{#set: centisome-position=61.890495   }}
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[CYANCAT-PWY]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5789]]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5743]]
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-241]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=33939}}
 +
{{#set: left-end-position=27138}}
 +
{{#set: centisome-position=43.40205   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=9}}

Latest revision as of 11:01, 18 March 2021

Gene SJ07762

  • transcription-direction:
    • negative
  • right-end-position:
    • 33939
  • left-end-position:
    • 27138
  • centisome-position:
    • 43.40205

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7115
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-7117
    • 10 reactions found over 14 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWYQT-4429
    • 2 reactions found over 2 reactions in the full pathway
  • CYANCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-241
    • 5 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07762&oldid=131960"