Difference between revisions of "SJ07762"

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(Created page with "Category:gene == Gene SJ22183 == * transcription-direction: ** negative * right-end-position: ** 19323 * left-end-position: ** 11412 * centisome-position: ** 6.3480763...")
(Created page with "Category:gene == Gene SJ21564 == * transcription-direction: ** positive * right-end-position: ** 372873 * left-end-position: ** 368358 * centisome-position: ** 61.890495...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ22183 ==
+
== Gene SJ21564 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 19323
+
** 372873
 
* left-end-position:
 
* left-end-position:
** 11412
+
** 368358
 
* centisome-position:
 
* centisome-position:
** 6.3480763    
+
** 61.890495    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[ARYLFORMAMIDASE-RXN]]
+
* [[HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-17150]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7717]]
+
* [[LEU-DEG2-PWY]]
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
* [[TRPCAT-PWY]]
+
* [[PWY66-367]]
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
* [[PWY-5651]]
+
* [[PWY-5074]]
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
* [[PWY-7765]]
+
{{#set: transcription-direction=positive}}
** '''3''' reactions found over '''5''' reactions in the full pathway
+
{{#set: right-end-position=372873}}
* [[PWY-6309]]
+
{{#set: left-end-position=368358}}
** '''7''' reactions found over '''11''' reactions in the full pathway
+
{{#set: centisome-position=61.890495   }}
* [[PWY-7733]]
 
** '''1''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7734]]
 
** '''1''' reactions found over '''10''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=19323}}
 
{{#set: left-end-position=11412}}
 
{{#set: centisome-position=6.3480763   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=3}}

Revision as of 15:15, 5 January 2021

Gene SJ21564

  • transcription-direction:
    • positive
  • right-end-position:
    • 372873
  • left-end-position:
    • 368358
  • centisome-position:
    • 61.890495

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • LEU-DEG2-PWY
    • 4 reactions found over 6 reactions in the full pathway
  • PWY66-367
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5074
    • 1 reactions found over 2 reactions in the full pathway