Difference between revisions of "SJ07909"

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(Created page with "Category:gene == Gene SJ18136 == * transcription-direction: ** positive * right-end-position: ** 199535 * left-end-position: ** 169115 * centisome-position: ** 67.15603...")
(Created page with "Category:gene == Gene SJ07909 == * transcription-direction: ** positive * right-end-position: ** 49612 * left-end-position: ** 35781 * centisome-position: ** 7.9968443...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ18136 ==
+
== Gene SJ07909 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 199535
+
** 49612
 
* left-end-position:
 
* left-end-position:
** 169115
+
** 35781
 
* centisome-position:
 
* centisome-position:
** 67.15603    
+
** 7.9968443    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[1.1.1.34-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ACOA120OR]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* [[ATPASE-RXN]]
+
* [[ACOA140OR]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACOA160OR]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACOA40OR]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACOA80OR]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACYLCOADEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[GLUTACONYL-COA-DECARBOXYLASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-12195]]
+
* [[GLUTARYL-COA-DEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-12196]]
+
* [[GLUTARYL-COA-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN0-5462]]
+
* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-922]]
+
* [[FAO-PWY]]
** '''7''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-6174]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7391]]
 
** '''7''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7524]]
 
** '''5''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7210]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7198]]
 
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
** '''6''' reactions found over '''7''' reactions in the full pathway
* [[PWY-7184]]
+
* [[PWY-7401]]
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''15''' reactions in the full pathway
* [[PWY-6545]]
+
* [[PWY-5177]]
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[P162-PWY]]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=199535}}
+
{{#set: right-end-position=49612}}
{{#set: left-end-position=169115}}
+
{{#set: left-end-position=35781}}
{{#set: centisome-position=67.15603   }}
+
{{#set: centisome-position=7.9968443   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=10}}
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:09, 18 March 2021

Gene SJ07909

  • transcription-direction:
    • positive
  • right-end-position:
    • 49612
  • left-end-position:
    • 35781
  • centisome-position:
    • 7.9968443

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7401
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-5177
    • 5 reactions found over 5 reactions in the full pathway
  • P162-PWY
    • 7 reactions found over 10 reactions in the full pathway