Difference between revisions of "SJ08018"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ13450 == * transcription-direction: ** positive * right-end-position: ** 436126 * left-end-position: ** 425411 * centisome-position: ** 58.388256...")
(Created page with "Category:gene == Gene SJ08018 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ13450 ==
+
== Gene SJ08018 ==
* transcription-direction:
 
** positive
 
* right-end-position:
 
** 436126
 
* left-end-position:
 
** 425411
 
* centisome-position:
 
** 58.388256   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2PGADEHYDRAT-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
** Category: [[annotation]]
+
* [[1.21.3.1-RXN]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[NARINGENIN-3-DIOXYGENASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-113]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-115]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-171]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-527]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-602]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-6550]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7648]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7775]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
+
* [[RXN-7922]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8450]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-162]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-163]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-165]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-167]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-168]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-93]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
* [[GLUCONEO-PWY]]
+
* [[PWY-5629]]
** '''12''' reactions found over '''13''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
* [[P124-PWY]]
+
* [[PWY1F-FLAVSYN]]
** '''12''' reactions found over '''15''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
* [[PWY-2221]]
+
* [[PWY-6787]]
** '''6''' reactions found over '''9''' reactions in the full pathway
 
* [[NPGLUCAT-PWY]]
 
** '''4''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-1622]]
 
** '''6''' reactions found over '''13''' reactions in the full pathway
 
* [[P122-PWY]]
 
** '''16''' reactions found over '''18''' reactions in the full pathway
 
* [[PWY-5484]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[P341-PWY]]
 
 
** '''6''' reactions found over '''10''' reactions in the full pathway
 
** '''6''' reactions found over '''10''' reactions in the full pathway
* [[GLYCOLYSIS]]
+
* [[PWY-102]]
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''4''' reactions found over '''11''' reactions in the full pathway
* [[ANAGLYCOLYSIS-PWY]]
+
* [[PWY-5390]]
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
* [[PWY66-399]]
+
* [[PWY-3101]]
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
* [[PWY-1042]]
+
* [[PWY-5059]]
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
* [[PWY-6142]]
+
* [[PWY1F-823]]
** '''10''' reactions found over '''13''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
* [[PWY-7003]]
+
* [[PWY-5152]]
** '''8''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
* [[PWY-6886]]
+
* [[PWY-5391]]
** '''8''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
* [[PWY-6901]]
+
* [[PWY-5070]]
** '''10''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
* [[PWY-7124]]
+
* [[PWY-5035]]
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
* [[PWY-5723]]
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-7218]]
 
** '''7''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6707]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6163]]
 
** '''6''' reactions found over '''5''' reactions in the full pathway
 
* [[QUINATEDEG-PWY]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6416]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
</div>
 
</div>
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=436126}}
 
{{#set: left-end-position=425411}}
 
{{#set: centisome-position=58.388256    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=18}}
{{#set: nb pathway associated=23}}
+
{{#set: nb pathway associated=12}}

Latest revision as of 11:06, 18 March 2021

Gene SJ08018

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5629
    • 1 reactions found over 2 reactions in the full pathway
  • PWY1F-FLAVSYN
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6787
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-102
    • 4 reactions found over 11 reactions in the full pathway
  • PWY-5390
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3101
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5059
    • 3 reactions found over 5 reactions in the full pathway
  • PWY1F-823
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5152
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5391
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5070
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5035
    • 2 reactions found over 7 reactions in the full pathway