Difference between revisions of "SJ09285"

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(Created page with "Category:gene == Gene SJ08693 == * transcription-direction: ** positive * right-end-position: ** 355625 * left-end-position: ** 342448 * centisome-position: ** 78.8591...")
(Created page with "Category:gene == Gene SJ09285 == * transcription-direction: ** positive * right-end-position: ** 299387 * left-end-position: ** 297649 * centisome-position: ** 70.76200...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ08693 ==
+
== Gene SJ09285 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 355625
+
** 299387
 
* left-end-position:
 
* left-end-position:
** 342448
+
** 297649
 
* centisome-position:
 
* centisome-position:
** 78.8591    
+
** 70.76200    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[APIGNAR-RXN]]
* [[1.11.1.15-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[PEROXID-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[CHALCONE-ISOMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-14240]]
+
* [[RXN-3221]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-15288]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7647]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-17352]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-8635]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5468]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7214]]
+
* [[PWY1F-FLAVSYN]]
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
* [[PWY-7445]]
+
* [[PWY-6787]]
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
* [[PWY-5466]]
+
* [[PWY-7397]]
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
* [[PWY-6824]]
+
* [[PWY-7897]]
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''15''' reactions in the full pathway
* [[PWY-5469]]
+
* [[PWY-2002]]
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
* [[PWY-5461]]
+
* [[PWY-6325]]
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5059]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=355625}}
+
{{#set: right-end-position=299387}}
{{#set: left-end-position=342448}}
+
{{#set: left-end-position=297649}}
{{#set: centisome-position=78.8591   }}
+
{{#set: centisome-position=70.76200   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=4}}
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:10, 18 March 2021

Gene SJ09285

  • transcription-direction:
    • positive
  • right-end-position:
    • 299387
  • left-end-position:
    • 297649
  • centisome-position:
    • 70.76200

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY1F-FLAVSYN
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6787
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-7397
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7897
    • 3 reactions found over 15 reactions in the full pathway
  • PWY-2002
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6325
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5059
    • 3 reactions found over 5 reactions in the full pathway