Difference between revisions of "SJ09766"

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(Created page with "Category:gene == Gene SJ22267 == * transcription-direction: ** positive * right-end-position: ** 465966 * left-end-position: ** 452486 * centisome-position: ** 77.6564...")
(Created page with "Category:gene == Gene SJ09766 == * transcription-direction: ** negative * right-end-position: ** 34273 * left-end-position: ** 21817 * centisome-position: ** 58.71098...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22267 ==
+
== Gene SJ09766 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 465966
+
** 34273
 
* left-end-position:
 
* left-end-position:
−
** 452486
+
** 21817
 
* centisome-position:
 
* centisome-position:
−
** 77.6564    
+
** 58.71098    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-4021]]
−
* [[1.11.1.15-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PEROXID-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN3O-178]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14240]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-267]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5468]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[PWY-2541]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''11''' reactions found over '''35''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[PWY-7155]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[PWY-6075]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6824]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
{{#set: right-end-position=34273}}
−
* [[PWY-5469]]
+
{{#set: left-end-position=21817}}
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
{{#set: centisome-position=58.71098   }}
−
* [[PWY-5461]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=465966}}
 
−
{{#set: left-end-position=452486}}
 
−
{{#set: centisome-position=77.6564   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:08, 18 March 2021

Gene SJ09766

  • transcription-direction:
    • negative
  • right-end-position:
    • 34273
  • left-end-position:
    • 21817
  • centisome-position:
    • 58.71098

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2541
    • 11 reactions found over 35 reactions in the full pathway
  • PWY-7155
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6075
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09766&oldid=135148"