Difference between revisions of "SJ10458"

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(Created page with "Category:gene == Gene SJ20802 == * transcription-direction: ** positive * right-end-position: ** 35694 * left-end-position: ** 28514 * centisome-position: ** 14.025717...")
(Created page with "Category:gene == Gene SJ07891 == * transcription-direction: ** negative * right-end-position: ** 34344 * left-end-position: ** 29673 * centisome-position: ** 48.846855...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ20802 ==
+
== Gene SJ07891 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 35694
+
** 34344
 
* left-end-position:
 
* left-end-position:
** 28514
+
** 29673
 
* centisome-position:
 
* centisome-position:
** 14.025717    
+
** 48.846855    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RXN-7737]]
+
* [[S-ADENMETSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-5097]]
+
* [[ETHYL-PWY]]
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
{{#set: transcription-direction=positive}}
+
* [[METHIONINE-DEG1-PWY]]
{{#set: right-end-position=35694}}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
{{#set: left-end-position=28514}}
+
* [[SAM-PWY]]
{{#set: centisome-position=14.025717   }}
+
** '''1''' reactions found over '''1''' reactions in the full pathway
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-5912]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5041]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=34344}}
 +
{{#set: left-end-position=29673}}
 +
{{#set: centisome-position=48.846855   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=5}}

Revision as of 14:50, 5 January 2021

Gene SJ07891

  • transcription-direction:
    • negative
  • right-end-position:
    • 34344
  • left-end-position:
    • 29673
  • centisome-position:
    • 48.846855

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • ETHYL-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • METHIONINE-DEG1-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • SAM-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5912
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5041
    • 3 reactions found over 4 reactions in the full pathway