Difference between revisions of "SJ12529"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ARACHIDONIC_ACID ARACHIDONIC_ACID] == * common-name: ** arachidonate * smiles: ** cccccc=ccc=cc...")
 
(Created page with "Category:gene == Gene SJ12529 == * transcription-direction: ** positive * right-end-position: ** 93783 * left-end-position: ** 84310 * centisome-position: ** 23.567461...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ARACHIDONIC_ACID ARACHIDONIC_ACID] ==
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== Gene SJ12529 ==
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* common-name:
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* transcription-direction:
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** arachidonate
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** positive
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* smiles:
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* right-end-position:
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** cccccc=ccc=ccc=ccc=ccccc(=o)[o-]
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** 93783
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* inchi-key:
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* left-end-position:
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** yzxbapsdxzzrgb-dofzraljsa-m
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** 84310
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* molecular-weight:
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* centisome-position:
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** 303.464
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** 23.567461   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[ARACHIDONATE-15-LIPOXYGENASE-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
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== Reaction(s) associated ==
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* [[RXN-13395]]
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* [[1TRANSKETO-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[RXN-16016]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN6666-2]]
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* [[2TRANSKETO-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=arachidonate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=yzxbapsdxzzrgb-dofzraljsa-m}}
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* [[DXS-RXN]]
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{{#set: molecular-weight=303.464}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[P124-PWY]]
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** '''12''' reactions found over '''15''' reactions in the full pathway
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* [[CALVIN-PWY]]
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** '''12''' reactions found over '''13''' reactions in the full pathway
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* [[P185-PWY]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-1861]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[P21-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[NONOXIPENT-PWY]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5723]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6901]]
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** '''10''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6891]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6892]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PYRIDOXSYN-PWY]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[NONMEVIPP-PWY]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7560]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=93783}}
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{{#set: left-end-position=84310}}
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{{#set: centisome-position=23.567461    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=13}}

Latest revision as of 11:01, 18 March 2021

Gene SJ12529

  • transcription-direction:
    • positive
  • right-end-position:
    • 93783
  • left-end-position:
    • 84310
  • centisome-position:
    • 23.567461

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-1861
    • 7 reactions found over 9 reactions in the full pathway
  • P21-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • NONOXIPENT-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-6901
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-6891
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6892
    • 5 reactions found over 7 reactions in the full pathway
  • PYRIDOXSYN-PWY
    • 3 reactions found over 7 reactions in the full pathway
  • NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7560
    • 9 reactions found over 9 reactions in the full pathway




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