Difference between revisions of "SJ12529"

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(Created page with "Category:gene == Gene SJ14038 == * transcription-direction: ** negative * right-end-position: ** 280295 * left-end-position: ** 275257 * centisome-position: ** 84.02331...")
(Created page with "Category:gene == Gene SJ12529 == * transcription-direction: ** positive * right-end-position: ** 93783 * left-end-position: ** 84310 * centisome-position: ** 23.567461...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ14038 ==
+
== Gene SJ12529 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 280295
+
** 93783
 
* left-end-position:
 
* left-end-position:
** 275257
+
** 84310
 
* centisome-position:
 
* centisome-position:
** 84.02331    
+
** 23.567461    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[ATPASE-RXN]]
+
* [[1TRANSKETO-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[2TRANSKETO-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-12195]]
+
* [[DXS-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7210]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
** '''8''' reactions found over '''8''' reactions in the full pathway
+
* [[P124-PWY]]
* [[PWY-7198]]
+
** '''12''' reactions found over '''15''' reactions in the full pathway
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [[CALVIN-PWY]]
* [[PWY-7184]]
+
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[P185-PWY]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-1861]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[P21-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[NONOXIPENT-PWY]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5723]]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6901]]
 +
** '''10''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6891]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6892]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PYRIDOXSYN-PWY]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[NONMEVIPP-PWY]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7560]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
* [[PWY-6545]]
+
</div>
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
{{#set: transcription-direction=negative}}
+
{{#set: right-end-position=93783}}
{{#set: right-end-position=280295}}
+
{{#set: left-end-position=84310}}
{{#set: left-end-position=275257}}
+
{{#set: centisome-position=23.567461   }}
{{#set: centisome-position=84.02331   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=13}}

Latest revision as of 11:01, 18 March 2021

Gene SJ12529

  • transcription-direction:
    • positive
  • right-end-position:
    • 93783
  • left-end-position:
    • 84310
  • centisome-position:
    • 23.567461

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-1861
    • 7 reactions found over 9 reactions in the full pathway
  • P21-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • NONOXIPENT-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-6901
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-6891
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6892
    • 5 reactions found over 7 reactions in the full pathway
  • PYRIDOXSYN-PWY
    • 3 reactions found over 7 reactions in the full pathway
  • NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7560
    • 9 reactions found over 9 reactions in the full pathway