Difference between revisions of "SJ15366"
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(Created page with "Category:gene == Gene SJ16976 == * transcription-direction: ** positive * right-end-position: ** 74608 * left-end-position: ** 60774 * centisome-position: ** 22.078121...") |
(Created page with "Category:gene == Gene SJ15203 == * transcription-direction: ** negative * right-end-position: ** 168210 * left-end-position: ** 162949 * centisome-position: ** 54.217297...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ15203 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 168210 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 162949 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 54.217297 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[IDI]] |
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[IPPISOM-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** ''' | + | * [[PWY-5123]] |
− | {{#set: transcription-direction= | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
− | {{#set: right-end-position= | + | * [[NONMEVIPP-PWY]] |
− | {{#set: left-end-position= | + | ** '''9''' reactions found over '''9''' reactions in the full pathway |
− | {{#set: centisome-position= | + | * [[PWY-6383]] |
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6174]] | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7560]] | ||
+ | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-7524]] | ||
+ | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-7391]] | ||
+ | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-922]] | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7102]] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-6859]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=168210}} | ||
+ | {{#set: left-end-position=162949}} | ||
+ | {{#set: centisome-position=54.217297 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=10}} |
Revision as of 08:15, 15 March 2021
Contents
Gene SJ15203
- transcription-direction:
- negative
- right-end-position:
- 168210
- left-end-position:
- 162949
- centisome-position:
- 54.217297
Organism(s) associated with this gene
Reaction(s) associated
- IDI
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- IPPISOM-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5123
- 3 reactions found over 3 reactions in the full pathway
- NONMEVIPP-PWY
- 9 reactions found over 9 reactions in the full pathway
- PWY-6383
- 2 reactions found over 5 reactions in the full pathway
- PWY-6174
- 6 reactions found over 7 reactions in the full pathway
- PWY-7560
- 9 reactions found over 9 reactions in the full pathway
- PWY-7524
- 5 reactions found over 8 reactions in the full pathway
- PWY-7391
- 7 reactions found over 8 reactions in the full pathway
- PWY-922
- 7 reactions found over 7 reactions in the full pathway
- PWY-7102
- 3 reactions found over 6 reactions in the full pathway
- PWY-6859
- 3 reactions found over 4 reactions in the full pathway