Difference between revisions of "SJ15366"

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(Created page with "Category:gene == Gene SJ16976 == * transcription-direction: ** positive * right-end-position: ** 74608 * left-end-position: ** 60774 * centisome-position: ** 22.078121...")
(Created page with "Category:gene == Gene SJ15203 == * transcription-direction: ** negative * right-end-position: ** 168210 * left-end-position: ** 162949 * centisome-position: ** 54.217297...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ16976 ==
+
== Gene SJ15203 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 74608
+
** 168210
 
* left-end-position:
 
* left-end-position:
** 60774
+
** 162949
 
* centisome-position:
 
* centisome-position:
** 22.078121    
+
** 54.217297    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[GLYCINE--TRNA-LIGASE-RXN]]
+
* [[IDI]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[IPPISOM-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[TRNA-CHARGING-PWY]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
** '''21''' reactions found over '''21''' reactions in the full pathway
+
* [[PWY-5123]]
{{#set: transcription-direction=positive}}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
{{#set: right-end-position=74608}}
+
* [[NONMEVIPP-PWY]]
{{#set: left-end-position=60774}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
{{#set: centisome-position=22.078121   }}
+
* [[PWY-6383]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6174]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7560]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7524]]
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7391]]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-922]]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7102]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6859]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=168210}}
 +
{{#set: left-end-position=162949}}
 +
{{#set: centisome-position=54.217297   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=10}}

Revision as of 08:15, 15 March 2021

Gene SJ15203

  • transcription-direction:
    • negative
  • right-end-position:
    • 168210
  • left-end-position:
    • 162949
  • centisome-position:
    • 54.217297

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5123
    • 3 reactions found over 3 reactions in the full pathway
  • NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6383
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6174
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7560
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7524
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-7391
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-922
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7102
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6859
    • 3 reactions found over 4 reactions in the full pathway