Difference between revisions of "SJ16098"

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(Created page with "Category:gene == Gene SJ05510 == * transcription-direction: ** positive * right-end-position: ** 435890 * left-end-position: ** 425828 * centisome-position: ** 86.1632...")
(Created page with "Category:gene == Gene SJ16098 == * transcription-direction: ** negative * right-end-position: ** 5978 * left-end-position: ** 1614 * centisome-position: ** 26.581028 =...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05510 ==
+
== Gene SJ16098 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 435890
+
** 5978
 
* left-end-position:
 
* left-end-position:
−
** 425828
+
** 1614
 
* centisome-position:
 
* centisome-position:
−
** 86.1632    
+
** 26.581028    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[5-NUCLEOTID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[AMP-DEPHOSPHORYLATION-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[NUCLEOTIDASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[RXN-14025]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14026]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14227]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14473]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17947]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17948]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-5841]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7607]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7609]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[XMPXAN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
* [[SALVADEHYPOX-PWY]]
−
* [[PWY-7198]]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-7821]]
−
* [[PWY-7184]]
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7185]]
−
* [[PWY-6545]]
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-5381]]
−
{{#set: transcription-direction=positive}}
+
** '''6''' reactions found over '''11''' reactions in the full pathway
−
{{#set: right-end-position=435890}}
+
* [[NAD-BIOSYNTHESIS-II]]
−
{{#set: left-end-position=425828}}
+
** '''4''' reactions found over '''3''' reactions in the full pathway
−
{{#set: centisome-position=86.1632   }}
+
* [[PWY-6596]]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6606]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6607]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6608]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5695]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=5978}}
 +
{{#set: left-end-position=1614}}
 +
{{#set: centisome-position=26.581028   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=14}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=10}}

Latest revision as of 11:01, 18 March 2021

Gene SJ16098

  • transcription-direction:
    • negative
  • right-end-position:
    • 5978
  • left-end-position:
    • 1614
  • centisome-position:
    • 26.581028

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7821
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-7185
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway
  • NAD-BIOSYNTHESIS-II
    • 4 reactions found over 3 reactions in the full pathway
  • PWY-6596
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-6606
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6607
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6608
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5695
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16098&oldid=132185"