Difference between revisions of "SJ16901"

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(Created page with "Category:gene == Gene SJ17324 == * transcription-direction: ** negative * right-end-position: ** 260837 * left-end-position: ** 248551 * centisome-position: ** 94.113884...")
(Created page with "Category:gene == Gene SJ16901 == * transcription-direction: ** negative * right-end-position: ** 128364 * left-end-position: ** 110101 * centisome-position: ** 39.93638...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17324 ==
+
== Gene SJ16901 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 260837
+
** 128364
 
* left-end-position:
 
* left-end-position:
−
** 248551
+
** 110101
 
* centisome-position:
 
* centisome-position:
−
** 94.113884    
+
** 39.93638    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[RXN-12587]]
+
* [[4-COUMARATE--COA-LIGASE-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12588]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14382]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14384]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-14385]]
+
* [[6.2.1.34-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-14386]]
+
* [[ACETATE--COA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[BUTYRATE--COA-LIGASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15881]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10919]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-9787]]
+
* [[RXN-1126]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-308]]
+
* [[RXN-2001]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[SELENOCYSTEINE-LYASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-6892]]
+
* [[PWY-7397]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7250]]
+
* [[PWY-6320]]
−
** '''5''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6891]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY0-1021]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6823]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7904]]
 
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7892]]
+
* [[PWY-6435]]
−
** '''3''' reactions found over '''11''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7891]]
+
* [[PWY1F-FLAVSYN]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7889]]
+
* [[PWY-361]]
 +
** '''7''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5135]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7888]]
+
* [[PWY-7398]]
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7046]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7897]]
 +
** '''3''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5754]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6920]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6982]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6343]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-1121]]
 +
** '''9''' reactions found over '''20''' reactions in the full pathway
 +
* [[PWY66-161]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7118]]
 +
** '''5''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY66-162]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1313]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6672]]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY66-21]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7007]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6673]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6457]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
</div>
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=260837}}
+
{{#set: right-end-position=128364}}
−
{{#set: left-end-position=248551}}
+
{{#set: left-end-position=110101}}
−
{{#set: centisome-position=94.113884   }}
+
{{#set: centisome-position=39.93638   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=10}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=23}}

Latest revision as of 11:03, 18 March 2021

Gene SJ16901

  • transcription-direction:
    • negative
  • right-end-position:
    • 128364
  • left-end-position:
    • 110101
  • centisome-position:
    • 39.93638

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7397
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6320
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6435
    • 4 reactions found over 5 reactions in the full pathway
  • PWY1F-FLAVSYN
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-361
    • 7 reactions found over 15 reactions in the full pathway
  • PWY-5135
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7398
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-7046
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7897
    • 3 reactions found over 15 reactions in the full pathway
  • PWY-5754
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6920
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6982
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6343
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1121
    • 9 reactions found over 20 reactions in the full pathway
  • PWY66-161
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7118
    • 5 reactions found over 4 reactions in the full pathway
  • PWY66-162
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1313
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6672
    • 4 reactions found over 9 reactions in the full pathway
  • PWY66-21
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7007
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6673
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6457
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16901&oldid=133157"