Difference between revisions of "SJ19480"

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(Created page with "Category:gene == Gene SJ13608 == * transcription-direction: ** positive * right-end-position: ** 186273 * left-end-position: ** 176539 * centisome-position: ** 52.994503...")
(Created page with "Category:gene == Gene SJ19480 == * transcription-direction: ** negative * right-end-position: ** 27974 * left-end-position: ** 21016 * centisome-position: ** 9.269624...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ13608 ==
+
== Gene SJ19480 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 186273
+
** 27974
 
* left-end-position:
 
* left-end-position:
** 176539
+
** 21016
 
* centisome-position:
 
* centisome-position:
** 52.994503    
+
** 9.269624    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2.4.1.151-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ARG-OXIDATION-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-1225]]
+
* [[L-AMINO-ACID-OXIDASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[L-ASPARTATE-OXID-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14971]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15378]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-18302]]
+
* [[RXN-17130]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9772]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7434]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
** '''5''' reactions found over '''8''' reactions in the full pathway
+
* [[ARGDEG-IV-PWY]]
* [[PWY-401]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[PYRIDNUCSYN-PWY]]
* [[PWY-7666]]
+
** '''6''' reactions found over '''6''' reactions in the full pathway
** '''1''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-5316]]
* [[PWY-7840]]
+
** '''3''' reactions found over '''9''' reactions in the full pathway
** '''3''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7342]]
{{#set: transcription-direction=positive}}
+
** '''4''' reactions found over '''9''' reactions in the full pathway
{{#set: right-end-position=186273}}
+
* [[PWY-6969]]
{{#set: left-end-position=176539}}
+
** '''10''' reactions found over '''9''' reactions in the full pathway
{{#set: centisome-position=52.994503   }}
+
* [[PWY-5690]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[P105-PWY]]
 +
** '''10''' reactions found over '''9''' reactions in the full pathway
 +
* [[TCA]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7254]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-561]]
 +
** '''6''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6728]]
 +
** '''11''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-3781]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7279]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1353]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY66-398]]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-4302]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1329]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=27974}}
 +
{{#set: left-end-position=21016}}
 +
{{#set: centisome-position=9.269624   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=8}}
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=17}}

Latest revision as of 11:09, 18 March 2021

Gene SJ19480

  • transcription-direction:
    • negative
  • right-end-position:
    • 27974
  • left-end-position:
    • 21016
  • centisome-position:
    • 9.269624

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • ARGDEG-IV-PWY
    • 1 reactions found over 4 reactions in the full pathway
  • PYRIDNUCSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5316
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-7342
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-6969
    • 10 reactions found over 9 reactions in the full pathway
  • PWY-5690
    • 8 reactions found over 9 reactions in the full pathway
  • P105-PWY
    • 10 reactions found over 9 reactions in the full pathway
  • TCA
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-7254
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-561
    • 6 reactions found over 4 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway
  • PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7279
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1353
    • 1 reactions found over 2 reactions in the full pathway
  • PWY66-398
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-4302
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1329
    • 1 reactions found over 2 reactions in the full pathway