Difference between revisions of "SJ20645"

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(Created page with "Category:gene == Gene SJ16378 == * transcription-direction: ** positive * right-end-position: ** 52522 * left-end-position: ** 36368 * centisome-position: ** 12.861973...")
 
(Created page with "Category:gene == Gene SJ20645 == * transcription-direction: ** negative * right-end-position: ** 481460 * left-end-position: ** 448626 * centisome-position: ** 72.762276...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ16378 ==
+
== Gene SJ20645 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 52522
+
** 481460
 
* left-end-position:
 
* left-end-position:
** 36368
+
** 448626
 
* centisome-position:
 
* centisome-position:
** 12.861973    
+
** 72.762276    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[ATPASE-RXN]]
+
* [[DEPHOSPHOCOAKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[PANTEPADENYLYLTRAN-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12195]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7210]]
+
* [[COA-PWY]]
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
* [[PWY-7198]]
+
* [[PWY-7851]]
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
* [[PWY-7184]]
+
{{#set: transcription-direction=negative}}
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=481460}}
* [[PWY-6545]]
+
{{#set: left-end-position=448626}}
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=72.762276   }}
* [[PWY-7511]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=52522}}
 
{{#set: left-end-position=36368}}
 
{{#set: centisome-position=12.861973   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:09, 18 March 2021

Gene SJ20645

  • transcription-direction:
    • negative
  • right-end-position:
    • 481460
  • left-end-position:
    • 448626
  • centisome-position:
    • 72.762276

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • COA-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7851
    • 3 reactions found over 4 reactions in the full pathway