Difference between revisions of "SJ21967"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SUCC-S-ALD SUCC-S-ALD] == * common-name: ** succinate semialdehyde * smiles: ** c([ch]=o)cc(=o)...")
(Created page with "Category:gene == Gene SJ06382 == * transcription-direction: ** positive * right-end-position: ** 154897 * left-end-position: ** 120228 * centisome-position: ** 25.259045...")
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SUCC-S-ALD SUCC-S-ALD] ==
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== Gene SJ06382 ==
* common-name:
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* transcription-direction:
** succinate semialdehyde
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** positive
* smiles:
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* right-end-position:
** c([ch]=o)cc(=o)[o-]
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** 154897
* inchi-key:
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* left-end-position:
** uiujiqzeacwqsv-uhfffaoysa-m
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** 120228
* molecular-weight:
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* centisome-position:
** 101.082
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** 25.259045   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[GABATRANSAM-RXN]]
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* [[S.japonica_sterols_curated]]
* [[RXN-14146]]
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== Reaction(s) associated ==
* [[RXN0-5293]]
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* [[3.6.4.4-RXN]]
* [[SSNOm]]
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** Category: [[annotation]]
* [[SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[SUCCSEMIALDDEHYDROG-RXN]]
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* [[ATPASE-RXN]]
== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
* [[4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[GABATRANSAM-RXN]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
* [[RXN-14146]]
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** Category: [[annotation]]
== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: common-name=succinate semialdehyde}}
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* [[RXN-12195]]
{{#set: inchi-key=inchikey=uiujiqzeacwqsv-uhfffaoysa-m}}
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** Category: [[annotation]]
{{#set: molecular-weight=101.082}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
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{{#set: right-end-position=154897}}
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{{#set: left-end-position=120228}}
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{{#set: centisome-position=25.259045    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=4}}

Revision as of 20:19, 18 December 2020

Gene SJ06382

  • transcription-direction:
    • positive
  • right-end-position:
    • 154897
  • left-end-position:
    • 120228
  • centisome-position:
    • 25.259045

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway