Difference between revisions of "SJ22218"

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(Created page with "Category:gene == Gene SJ04548 == * transcription-direction: ** positive * right-end-position: ** 365947 * left-end-position: ** 334407 * centisome-position: ** 65.665016...")
(Created page with "Category:gene == Gene SJ22218 == * transcription-direction: ** negative * right-end-position: ** 179264 * left-end-position: ** 165936 * centisome-position: ** 92.476425...")
 
(4 intermediate revisions by 2 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ04548 ==
+
== Gene SJ22218 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 365947
+
** 179264
 
* left-end-position:
 
* left-end-position:
** 334407
+
** 165936
 
* centisome-position:
 
* centisome-position:
** 65.665016    
+
** 92.476425    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2.7.11.30-RXN]]
+
* [[RXN-11837]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[PROTEIN-KINASE-RXN]]
+
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-8443]]
+
{{#set: transcription-direction=negative}}
** Category: [[orthology]]
+
{{#set: right-end-position=179264}}
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=165936}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: centisome-position=92.476425   }}
== Pathway(s) associated ==
 
* [[PWY-5381]]
 
** '''6''' reactions found over '''11''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=365947}}
 
{{#set: left-end-position=334407}}
 
{{#set: centisome-position=65.665016   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=1}}
 

Latest revision as of 11:00, 18 March 2021

Gene SJ22218

  • transcription-direction:
    • negative
  • right-end-position:
    • 179264
  • left-end-position:
    • 165936
  • centisome-position:
    • 92.476425

Organism(s) associated with this gene

Reaction(s) associated