Difference between revisions of "SJ22529"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-P-PANTOTHENATE 4-P-PANTOTHENATE] == * common-name: ** (r)-4'-phosphopantothenate * smiles: **...")
 
(Created page with "Category:gene == Gene SJ22529 == * transcription-direction: ** negative * right-end-position: ** 91661 * left-end-position: ** 84007 * centisome-position: ** 48.17827...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-P-PANTOTHENATE 4-P-PANTOTHENATE] ==
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== Gene SJ22529 ==
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* common-name:
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* transcription-direction:
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** (r)-4'-phosphopantothenate
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** negative
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* smiles:
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* right-end-position:
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** cc(c(c(=o)nccc(=o)[o-])o)(cop([o-])([o-])=o)c
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** 91661
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* inchi-key:
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* left-end-position:
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** xhfvghpgdldeqo-zetcqymhsa-k
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** 84007
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* molecular-weight:
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* centisome-position:
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** 296.193
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** 48.17827   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[P-PANTOCYSLIG-RXN]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[PANTOTHENATE-KIN-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[DCTP-PYROPHOSPHATASE-RXN]]
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{{#set: common-name=(r)-4'-phosphopantothenate}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=xhfvghpgdldeqo-zetcqymhsa-k}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=296.193}}
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* [[DUTP-PYROP-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[NADPYROPHOSPHAT-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-11396]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14139]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14140]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-383]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-384]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-385]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-4401]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5107]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-6382]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-7206]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7187]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY0-166]]
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** '''14''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6147]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[NAD-BIOSYNTHESIS-II]]
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** '''4''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7761]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5381]]
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** '''6''' reactions found over '''11''' reactions in the full pathway
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* [[PYRIDNUCSAL-PWY]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6502]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7821]]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=91661}}
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{{#set: left-end-position=84007}}
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{{#set: centisome-position=48.17827    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=14}}
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{{#set: nb pathway associated=12}}

Latest revision as of 11:00, 18 March 2021

Gene SJ22529

  • transcription-direction:
    • negative
  • right-end-position:
    • 91661
  • left-end-position:
    • 84007
  • centisome-position:
    • 48.17827

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7206
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7187
    • 6 reactions found over 7 reactions in the full pathway
  • PWY0-166
    • 14 reactions found over 13 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6147
    • 5 reactions found over 5 reactions in the full pathway
  • NAD-BIOSYNTHESIS-II
    • 4 reactions found over 3 reactions in the full pathway
  • PWY-7761
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway
  • PYRIDNUCSAL-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6502
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7821
    • 2 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22529&oldid=131627"