Difference between revisions of "SPHINGOSINE-N-ACYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-8988 == * direction: ** left-to-right * common-name: ** itaconyl-coa synthetase * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.4 ec-6...")
(Created page with "Category:reaction == Reaction 6.3.4.9-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.9 ec-6.3.4.9] == Reaction formula == * 1 AT...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-8988 ==
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== Reaction 6.3.4.9-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** itaconyl-coa synthetase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/6.2.1.4 ec-6.2.1.4]
+
** [http://enzyme.expasy.org/EC/6.3.4.9 ec-6.3.4.9]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[ITACONATE]][c] '''=>''' 1 [[CPD-1137]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[Pi]][c]
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* 1 [[ATP]][c] '''+''' 1 [[BIOTIN]][c] '''+''' 1 [[apo-Transcarboxylases]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[holo-Transcarboxylases]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ03269]]
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* Gene: [[SJ07132]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10816]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06657]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19949]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ21782]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5749]], itaconate degradation:
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R02405 R02405]
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** [http://www.genome.jp/dbget-bin/www_bget?R04563 R04563]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=itaconyl-coa synthetase}}
+
{{#set: ec-number=ec-6.3.4.9}}
{{#set: ec-number=ec-6.2.1.4}}
+
{{#set: nb gene associated=4}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:19, 14 January 2021

Reaction 6.3.4.9-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links