Difference between revisions of "SUCL LPAREN gdp RPAREN m"

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(Created page with "Category:reaction == Reaction R-2-METHYLMALATE-DEHYDRATASE-RXN == * direction: ** reversible * common-name: ** (r)-2-methylmalate hydro-lyase (2-methylmaleate-forming) * e...")
(Created page with "Category:reaction == Reaction SUCL_LPAREN_gdp_RPAREN_m == * direction: ** reversible * common-name: ** succinyl-coa ligase (gdp-forming) == Reaction formula == * 1.0 CO-...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction R-2-METHYLMALATE-DEHYDRATASE-RXN ==
+
== Reaction SUCL_LPAREN_gdp_RPAREN_m ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
** (r)-2-methylmalate hydro-lyase (2-methylmaleate-forming)
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** succinyl-coa ligase (gdp-forming)
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.2.1.35 ec-4.2.1.35]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-31]][c] '''<=>''' 1 [[2-METHYLMALEATE]][c] '''+''' 1 [[WATER]][c]
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* 1.0 [[CO-A]][m] '''+''' 1.0 [[GTP]][m] '''+''' 1.0 [[SUC]][m] '''<=>''' 1.0 [[GDP]][m] '''+''' 1.0 [[Pi]][m] '''+''' 1.0 [[SUC-COA]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ09771]]
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* Gene: [[SJ03269]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ22396]]
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* Gene: [[SJ21782]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5101]], L-isoleucine biosynthesis II:
 
** '''4''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7698]], 2,5-xylenol and 3,5-xylenol degradation:
 
** '''1''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22332 22332]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03896 R03896]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: common-name=(r)-2-methylmalate hydro-lyase (2-methylmaleate-forming)}}
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{{#set: common-name=succinyl-coa ligase (gdp-forming)}}
{{#set: ec-number=ec-4.2.1.35}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=2}}
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{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:21, 18 March 2021

Reaction SUCL_LPAREN_gdp_RPAREN_m

  • direction:
    • reversible
  • common-name:
    • succinyl-coa ligase (gdp-forming)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links