Difference between revisions of "TOCOPHEROL-O-METHYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction PREPHENATEDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** prephenate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction 6.3.2.25-RXN == * direction: ** left-to-right * common-name: ** tubulin-tyrosine ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.3.2.25...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction PREPHENATEDEHYDROG-RXN ==
+
== Reaction 6.3.2.25-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** prephenate dehydrogenase
+
** tubulin-tyrosine ligase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.3.1.12 ec-1.3.1.12]
+
** [http://enzyme.expasy.org/EC/6.3.2.25 ec-6.3.2.25]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NAD]][c] '''+''' 1 [[PREPHENATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[Detyrosinated-alpha--tubulins]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Alpha-tubulins]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ00045]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ19915]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08327]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19490]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06727]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07175]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03083]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19648]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18654]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16360]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21563]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ22079]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00218]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03297]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7303]], 3-dimethylallyl-4-hydroxybenzoate biosynthesis:
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[TYRSYN]], L-tyrosine biosynthesis I:
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13870 13870]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R01728 R01728]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04730 R04730]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/Q9CET9 Q9CET9]
+
** [http://www.uniprot.org/uniprot/P38160 P38160]
** [http://www.uniprot.org/uniprot/Q9PIZ7 Q9PIZ7]
 
** [http://www.uniprot.org/uniprot/P43902 P43902]
 
** [http://www.uniprot.org/uniprot/P07023 P07023]
 
** [http://www.uniprot.org/uniprot/Q04983 Q04983]
 
** [http://www.uniprot.org/uniprot/Q02287 Q02287]
 
** [http://www.uniprot.org/uniprot/P43901 P43901]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=prephenate dehydrogenase}}
+
{{#set: common-name=tubulin-tyrosine ligase}}
{{#set: ec-number=ec-1.3.1.12}}
+
{{#set: ec-number=ec-6.3.2.25}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=13}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:21, 15 January 2021

Reaction 6.3.2.25-RXN

  • direction:
    • left-to-right
  • common-name:
    • tubulin-tyrosine ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links