Difference between revisions of "TRIMETHYLLYSINE-DIOXYGENASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-10036 == * direction: ** left-to-right * common-name: ** phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase ** pi(3,4,5)p3 5-phosphat...")
(Created page with "Category:reaction == Reaction TRIMETHYLLYSINE-DIOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** trimethyllysine dioxygenase * ec-number: ** [http://enzyme...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-10036 ==
+
== Reaction TRIMETHYLLYSINE-DIOXYGENASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase
+
** trimethyllysine dioxygenase
** pi(3,4,5)p3 5-phosphatase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.3.86 ec-3.1.3.86]
+
** [http://enzyme.expasy.org/EC/1.14.11.8 ec-1.14.11.8]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[PHOSPHATIDYLINOSITOL-345-TRIPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[N6N6N6-TRIMETHYL-L-LYSINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ05163]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ15054]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ11565]]
+
* Gene: [[SJ07386]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ20267]]
+
* Gene: [[SJ12451]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04638]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09343]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04640]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04639]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18761]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ01929]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6368]], 3-phosphoinositide degradation:
+
* [[PWY-6100]], L-carnitine biosynthesis:
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR108181
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14182 14182]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R09827 R09827]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03451 R03451]
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25531 25531]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=pi(3,4,5)p3 5-phosphatase|phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase}}
+
{{#set: common-name=trimethyllysine dioxygenase}}
{{#set: ec-number=ec-3.1.3.86}}
+
{{#set: ec-number=ec-1.14.11.8}}
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=9}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Latest revision as of 11:22, 18 March 2021

Reaction TRIMETHYLLYSINE-DIOXYGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • trimethyllysine dioxygenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6100, L-carnitine biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR108181
  • RHEA:
  • LIGAND-RXN: