Difference between revisions of "TRYPSYN-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-16113 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134] == Reaction formula == * 1 ...")
(Created page with "Category:reaction == Reaction RXN-10821 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.192 ec-2.3.1.192] == Reaction formula == * 1 ...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-16113 ==
+
== Reaction RXN-10821 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134]
+
** [http://enzyme.expasy.org/EC/2.3.1.192 ec-2.3.1.192]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-17367]][c] '''=>''' 1 [[CPD-17368]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD-207]][c] '''+''' 1 [[GLY]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-11715]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ06882]]
+
* Gene: [[SJ15041]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ00783]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase):
+
* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain):
** '''8''' reactions found over '''13''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
* [[PWY-7728]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase):
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27851 27851]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05841 R05841]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-4.2.1.134}}
+
{{#set: ec-number=ec-2.3.1.192}}
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:07, 14 January 2021

Reaction RXN-10821

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6318, L-phenylalanine degradation IV (mammalian, via side chain):
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links