Difference between revisions of "TRYPTOPHAN--TRNA-LIGASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-7979 == * direction: ** left-to-right * synonymous: ** zea-epoxidase == Reaction formula == * 1 CPD1F-131[c] '''+''' 1 OXYGEN-MOLEC...")
(Created page with "Category:reaction == Reaction HOMSUCTRAN-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.46 ec-2.3.1.46] == Reaction formula == * 1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7979 ==
+
== Reaction HOMSUCTRAN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
+
* ec-number:
−
** zea-epoxidase
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** [http://enzyme.expasy.org/EC/2.3.1.46 ec-2.3.1.46]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD1F-131]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD1F-133]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[HOMO-SER]][c] '''+''' 1 [[SUC-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ1973]]
 
−
** Category: [[manual]]
 
−
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5174]], capsanthin and capsorubin biosynthesis:
+
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
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** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5945]], violaxanthin, antheraxanthin and zeaxanthin interconversion:
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of antheraxanthin into violaxanthin (first cycle of xanthophylls)
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14938 14938]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22009 22009]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07200 R07200]
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** [http://www.genome.jp/dbget-bin/www_bget?R01777 R01777]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9PLV2 Q9PLV2]
 +
** [http://www.uniprot.org/uniprot/Q9CEC5 Q9CEC5]
 +
** [http://www.uniprot.org/uniprot/P07623 P07623]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=zea-epoxidase}}
+
{{#set: ec-number=ec-2.3.1.46}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction comment=transformation of antheraxanthin into violaxanthin (first cycle of xanthophylls)}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=sjap}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 11:28, 15 January 2021

Reaction HOMSUCTRAN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I:
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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